KEGG   PATHWAY: dov00630
Entry
dov00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Desulfosarcina ovata subsp. sediminis
Class
Metabolism; Carbohydrate metabolism
Pathway map
dov00630  Glyoxylate and dicarboxylate metabolism
dov00630

Module
dov_M00621  Glycine cleavage system [PATH:dov00630]
Other DBs
GO: 0046487 0043648
Organism
Desulfosarcina ovata subsp. sediminis [GN:dov]
Gene
DSCO28_26680  acsA_1; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DSCO28_26710  acsA_2; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DSCO28_06590  acs; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DSCO28_15370  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
DSCO28_46640  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DSCO28_00250  hypothetical protein [KO:K00024] [EC:1.1.1.37]
DSCO28_06510  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
DSCO28_58130  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
DSCO28_35940  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
DSCO28_09410  acoA_2; aconitate hydratase A [KO:K01681] [EC:4.2.1.3]
DSCO28_05170  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_15930  thl_1; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_17290  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_44060  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_67860  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_71510  thl_2; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_15380  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_15430  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_19960  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_10760  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_57290  hypothetical protein [KO:K00626] [EC:2.3.1.9]
DSCO28_67730  hypothetical protein [KO:K00626] [EC:2.3.1.9]
DSCO28_17370  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DSCO28_47180  phaJ; (R)-specific enoyl-CoA hydratase [KO:K17865] [EC:4.2.1.55]
DSCO28_49000  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
DSCO28_39210  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
DSCO28_18580  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
DSCO28_10390  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
DSCO28_56480  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
DSCO28_41540  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
DSCO28_56400  methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
DSCO28_56410  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
DSCO28_47750  glcD-2; FAD-binding protein [KO:K00104] [EC:1.1.99.14]
DSCO28_48990  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
DSCO28_47740  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
DSCO28_33060  katA; catalase [KO:K03781] [EC:1.11.1.6]
DSCO28_27420  catalase [KO:K03781] [EC:1.11.1.6]
DSCO28_55080  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
DSCO28_59450  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
DSCO28_49070  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
DSCO28_49890  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
DSCO28_42410  glycine dehydrogenase [KO:K00282] [EC:1.4.4.2]
DSCO28_04590  gcvP; putative glycine dehydrogenase (decarboxylating) subunit 1 [KO:K00282] [EC:1.4.4.2]
DSCO28_42420  gcvPB; putative glycine dehydrogenase (decarboxylating) subunit 2 [KO:K00283] [EC:1.4.4.2]
DSCO28_04600  glycine dehydrogenase [KO:K00283] [EC:1.4.4.2]
DSCO28_42390  hypothetical protein [KO:K00605] [EC:2.1.2.10]
DSCO28_16760  lpdA_1; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DSCO28_50160  lpdA-1; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DSCO28_52050  lpdA_2; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DSCO28_63940  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DSCO28_42400  gcvH; glycine cleavage system H protein [KO:K02437]
DSCO28_41950  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
DSCO28_57860  hypothetical protein [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
DSCO28_57360  hypothetical protein [KO:K00124]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
dov00010  Glycolysis / Gluconeogenesis
dov00020  Citrate cycle (TCA cycle)
dov00030  Pentose phosphate pathway
dov00053  Ascorbate and aldarate metabolism
dov00071  Fatty acid degradation
dov00230  Purine metabolism
dov00250  Alanine, aspartate and glutamate metabolism
dov00260  Glycine, serine and threonine metabolism
dov00620  Pyruvate metabolism
dov00710  Carbon fixation by Calvin cycle
dov00750  Vitamin B6 metabolism
dov00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system