KEGG   PATHWAY: ecad00630
Entry
ecad00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Erigeron canadensis (horseweed)
Class
Metabolism; Carbohydrate metabolism
Pathway map
ecad00630  Glyoxylate and dicarboxylate metabolism
ecad00630

Module
ecad_M00012  Glyoxylate cycle [PATH:ecad00630]
ecad_M00532  Photorespiration [PATH:ecad00630]
ecad_M00621  Glycine cleavage system [PATH:ecad00630]
Other DBs
GO: 0046487 0043648
Organism
Erigeron canadensis (horseweed) [GN:ecad]
Gene
122584839  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
122604073  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
122579659  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
122582214  acetate--CoA ligase CCL3 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
122580214  malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
122597992  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
122600426  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
122579908  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
122595213  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
122607443  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
122586743  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
122599168  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
122600536  malate dehydrogenase 1, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
122581292  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
122595109  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
122609270  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
122592625  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
122599081  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
122602001  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
122590516  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
122595106  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
122584190  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
122602185  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
122591230  (S)-2-hydroxy-acid oxidase GLO1 [KO:K11517] [EC:1.1.3.15]
122595423  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
122595424  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
122595535  (S)-2-hydroxy-acid oxidase GLO1-like [KO:K11517] [EC:1.1.3.15]
122596600  (S)-2-hydroxy-acid oxidase GLO1-like isoform X1 [KO:K11517] [EC:1.1.3.15]
122607110  catalase isoform X1 [KO:K03781] [EC:1.11.1.6]
122607131  catalase-like isoform X1 [KO:K03781] [EC:1.11.1.6]
122578514  glyoxylate/hydroxypyruvate reductase HPR3 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
122593091  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
122581340  glyoxylate/succinic semialdehyde reductase 1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
122581341  glyoxylate/succinic semialdehyde reductase 1-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
122595760  glyoxylate/succinic semialdehyde reductase 2, chloroplastic isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
122611170  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
122582063  phosphoglycolate phosphatase 2 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
122587189  phosphoglycolate phosphatase 1A, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
122584317  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
122584364  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
54108549  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
122604550  ribulose bisphosphate carboxylase small subunit, chloroplastic 3-like [KO:K01602] [EC:4.1.1.39]
122605012  ribulose bisphosphate carboxylase small subunit, chloroplastic [KO:K01602] [EC:4.1.1.39]
122595071  ribulose bisphosphate carboxylase small subunit, chloroplastic 2 [KO:K01602] [EC:4.1.1.39]
122588819  ribulose bisphosphate carboxylase small subunit, chloroplastic [KO:K01602] [EC:4.1.1.39]
122598977  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
122595142  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
122598267  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
122581218  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
122602545  glutamine synthetase PR-2 isoform X1 [KO:K01915] [EC:6.3.1.2]
122603174  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
122595675  glutamine synthetase, chloroplastic [KO:K01915] [EC:6.3.1.2]
122610023  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
122587039  glutamine synthetase nodule isozyme isoform X1 [KO:K01915] [EC:6.3.1.2]
122578199  serine hydroxymethyltransferase 3, chloroplastic [KO:K00600] [EC:2.1.2.1]
122603112  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
122603245  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
122591317  serine hydroxymethyltransferase 6-like [KO:K00600] [EC:2.1.2.1]
122611255  LOW QUALITY PROTEIN: serine hydroxymethyltransferase 2, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
122586530  serine hydroxymethyltransferase 1, mitochondrial [KO:K00600] [EC:2.1.2.1]
122578450  glycine dehydrogenase (decarboxylating) A, mitochondrial [KO:K00281] [EC:1.4.4.2]
122599260  glycine dehydrogenase (decarboxylating) A, mitochondrial-like [KO:K00281] [EC:1.4.4.2]
122592932  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
122602394  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
122578403  dihydrolipoyl dehydrogenase 1, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
122595555  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
122610755  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
122604964  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
122611206  glycine cleavage system H protein, mitochondrial [KO:K02437]
122606715  D-glycerate 3-kinase, chloroplastic [KO:K15918] [EC:2.7.1.31]
122603095  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
122610339  formyltetrahydrofolate deformylase 1, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
122605158  formamidase-like isoform X1 [KO:K01455] [EC:3.5.1.49]
122586366  probable CoA ligase CCL9 [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
ecad00010  Glycolysis / Gluconeogenesis
ecad00020  Citrate cycle (TCA cycle)
ecad00030  Pentose phosphate pathway
ecad00053  Ascorbate and aldarate metabolism
ecad00071  Fatty acid degradation
ecad00230  Purine metabolism
ecad00250  Alanine, aspartate and glutamate metabolism
ecad00260  Glycine, serine and threonine metabolism
ecad00620  Pyruvate metabolism
ecad00710  Carbon fixation by Calvin cycle
ecad00750  Vitamin B6 metabolism
ecad00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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