KEGG   PATHWAY: ecok02024
Entry
ecok02024                   Pathway                                
Name
Quorum sensing - Escherichia coli K-12 MDS42
Description
Quorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal molecules called autoinducers (AIs) that increase in concentration as a function of cell density. The most commonly studied AIs belong to one of the following three categories: acylated homoserine lactones, also referred to as AI-1, used by Gram-negative bacteria; peptide signals, used by Gram-positive bacteria; and AI-2, used by both Gram-negative and Gram-positive bacteria. QS can be divided into at least 4 steps: production of AIs by the bacterial cell; release of AIs, either actively or passively, into the surrounding environment; recognition of AIs by specific receptors; and leading to changes in gene regulation once they exceed a threshold concentration. The processes controlled by QS include virulence, competence, conjugation, antibiotic production, motility, sporulation, and biofilm formation.
Class
Cellular Processes; Cellular community - prokaryotes
Pathway map
ecok02024  Quorum sensing
ecok02024

Other DBs
GO: 0009372
Organism
Escherichia coli K-12 MDS42 [GN:ecok]
Gene
ECMDS42_2191  luxS; S-ribosylhomocysteinase [KO:K07173] [EC:4.4.1.21]
ECMDS42_3614  hfq; HF-I, host factor for RNA phage Q beta replication [KO:K03666]
ECMDS42_1059  trpE; component I of anthranilate synthase [KO:K01657] [EC:4.1.3.27]
ECMDS42_1377  aroH; 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible [KO:K01626] [EC:2.5.1.54]
ECMDS42_0604  aroG; 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible [KO:K01626] [EC:2.5.1.54]
ECMDS42_2145  aroF; 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible [KO:K01626] [EC:2.5.1.54]
ECMDS42_2501  qseC; sensory histidine kinase in two-component regulatory system with QseB [KO:K07645] [EC:2.7.13.3]
ECMDS42_2500  qseB; DNA-binding response regulator in two-component regulatory system with QseC [KO:K07666]
ECMDS42_2100  yfhK; predicted sensory kinase in two-component system [KO:K07711] [EC:2.7.13.3]
ECMDS42_2098  yfhA; predicted DNA-binding response regulator in two-component system [KO:K07715]
ECMDS42_0550  kdpE; DNA-binding response regulator in two-component regulatory system with KdpD [KO:K07667]
ECMDS42_1576  sdiA; DNA-binding transcriptional activator [KO:K07782]
ECMDS42_1205  gadB; glutamate decarboxylase B, PLP-dependent [KO:K01580] [EC:4.1.1.15]
ECMDS42_2952  gadA; glutamate decarboxylase A, PLP-dependent [KO:K01580] [EC:4.1.1.15]
ECMDS42_1204  gadC; predicted glutamate:gamma-aminobutyric acid antiporter [KO:K20265]
ECMDS42_1227  lsrB; AI2 transporter [KO:K10555]
ECMDS42_1225  lsrC; AI2 transporter [KO:K10556]
ECMDS42_1226  lsrD; AI2 transporter [KO:K10557]
ECMDS42_1224  ego; fused AI2 transporter subunits [KO:K10558]
ECMDS42_1222  ydeV; predicted sugar kinase [KO:K11216] [EC:2.7.1.189]
ECMDS42_1223  ydeW; predicted DNA-binding transcriptional regulator [KO:K11531]
ECMDS42_1228  lsrF; predicted aldolase [KO:K08321] [EC:2.3.1.245]
ECMDS42_1229  lsrG; conserved protein [KO:K11530] [EC:5.3.1.32]
ECMDS42_1159  ydcS; predicted spermidine/putrescine transporter subunit [KO:K02055]
ECMDS42_1162  ydcV; predicted spermidine/putrescine transporter subunit [KO:K02053]
ECMDS42_1161  ydcU; predicted spermidine/putrescine transporter subunit [KO:K02054]
ECMDS42_1160  ydcT; predicted spermidine/putrescine transporter subunit [KO:K02052]
ECMDS42_2897  livK; leucine transporter subunit [KO:K01999]
ECMDS42_2899  livJ; leucine/isoleucine/valine transporter subunit [KO:K01999]
ECMDS42_2896  livH; leucine/isoleucine/valine transporter subunit [KO:K01997]
ECMDS42_2895  livM; leucine/isoleucine/valine transporter subunit [KO:K01998]
ECMDS42_2894  livG; leucine/isoleucine/valine transporter subunit [KO:K01995]
ECMDS42_2893  livF; leucine/isoleucine/valine transporter subunit [KO:K01996]
ECMDS42_1577  rcsA; DNA-binding transcriptional co-regulator with RcsB [KO:K07781]
ECMDS42_1083  gmr; modulator of Rnase II stability [KO:K14051] [EC:3.1.4.52]
ECMDS42_1479  fadD; acyl-CoA synthetase [KO:K01897] [EC:6.2.1.3]
ECMDS42_2804  crp; DNA-binding transcriptional dual regulator [KO:K10914]
ECMDS42_3484  zur; DNA-binding transcriptional activator, Zn(II)-binding [KO:K09823]
ECMDS42_1075  ribA; GTP cyclohydrolase II [KO:K01497] [EC:3.5.4.25]
ECMDS42_0313  ribD; fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [KO:K11752] [EC:3.5.4.26 1.1.1.193]
ECMDS42_1166  ydcZ; predicted inner membrane protein [KO:K09936]
ECMDS42_1038  oppA; oligopeptide transporter subunit [KO:K15580]
ECMDS42_1039  oppB; oligopeptide transporter subunit [KO:K15581]
ECMDS42_1040  oppC; oligopeptide transporter subunit [KO:K15582]
ECMDS42_1041  oppD; oligopeptide transporter subunit [KO:K15583]
ECMDS42_1042  oppF; oligopeptide transporter subunit [KO:K10823]
ECMDS42_1199  ddpA; D-Ala-D-Ala transporter subunit [KO:K02035]
ECMDS42_2495  ygiS; predicted transporter subunit [KO:K02035]
ECMDS42_1198  ddpB; D-Ala-D-Ala transporter subunit [KO:K02033]
ECMDS42_1197  ddpC; D-Ala-D-Ala transporter subunit [KO:K02034]
ECMDS42_1196  ddpD; D-Ala-D-Ala transporter subunit [KO:K02031]
ECMDS42_1195  ddpF; D-Ala-D-Ala transporter subunit [KO:K02032]
ECMDS42_3142  yidC; cytoplasmic insertase into membrane protein, Sec system [KO:K03217]
ECMDS42_3418  secE; preprotein translocase membrane subunit [KO:K03073]
ECMDS42_2643  secG; preprotein translocase membrane subunit [KO:K03075]
ECMDS42_2762  secY; preprotein translocase membrane subunit [KO:K03076]
ECMDS42_0306  yajC; SecYEG protein translocase auxillary subunit [KO:K03210]
ECMDS42_0091  secA; preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon [KO:K03070] [EC:7.4.2.8]
ECMDS42_2903  ftsY; fused signal recognition particle (SRP) receptor [KO:K03110]
ECMDS42_3043  secB; protein export chaperone [KO:K03071]
ECMDS42_2154  ffh; signal recognition particle (SRP) component with 4.5S RNA [KO:K03106] [EC:3.6.5.4]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00059  Sulfate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00547  L-Noradrenaline
C00788  L-Adrenaline
C01019  L-Fucose
C11837  N-Butyryl-L-homoserine lactone
C11841  N-(3-Oxooctanoyl)homoserine lactone
C11844  N-Heptanoylhomoserine lactone
C11845  N-(3-Hydroxy-7-cis-tetradecenoyl)homoserine lactone
C11848  2-Heptyl-3-hydroxy-quinolone
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C18049  N-Acyl-L-homoserine lactone
C18206  cis-11-Methyl-2-dodecenoic acid
C20643  2-Heptyl-4(1H)-quinolone
C20677  N-(4-Coumaroyl)-L-homoserine lactone
C20959  (4S)-4-Hydroxy-5-phosphooxypentane-2,3-dione
C21195  N-(3-Hydroxybutanoyl)-L-homoserine lactone
C21197  N-Hexanoyl-L-homoserine lactone
C21198  N-(3-Oxohexanoyl)-L-homoserine lactone
C21199  N-Octanoyl-L-homoserine lactone
C21200  N-3-Hydroxyoctanoyl-L-homoserine lactone
C21201  N-3-Oxo-dodecanoyl-L-homoserine lactone
C21202  cis-2-Dodecenoic acid
C21220  AIP-1
C21221  CSP
C21222  CSP
C21223  Blp
C21224  SHP2
C21225  SHP3
C21226  cCF10
C21227  iCF10
C21228  cAD1
C21229  iAD1
C21230  ComX pheromone
C21231  PhrA pentapeptide
C21232  PhrC pentapeptide
C21233  PhrE pentapeptide
C21234  PhrF pentapeptide
C21235  PhrG pentapeptide
C21236  PhrH pentapeptide
C21237  PhrK pentapeptide
C21238  NprX peptide
C21239  PapR peptide
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21244  AgrD peptide
C21245  AgrD1 peptide
C21246  GBAP
C21382  R-THMF
Reference
  Authors
Pereira CS, Thompson JA, Xavier KB
  Title
AI-2-mediated signalling in bacteria.
  Journal
FEMS Microbiol Rev 37:156-81 (2013)
DOI:10.1111/j.1574-6976.2012.00345.x
Reference
  Authors
Verma SC, Miyashiro T
  Title
Quorum sensing in the squid-Vibrio symbiosis.
  Journal
Int J Mol Sci 14:16386-401 (2013)
DOI:10.3390/ijms140816386
Reference
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Norsworthy AN, Visick KL
  Title
Gimme shelter: how Vibrio fischeri successfully navigates an animal's multiple environments.
  Journal
Front Microbiol 4:356 (2013)
DOI:10.3389/fmicb.2013.00356
Reference
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Papaioannou E, Utari PD, Quax WJ
  Title
Choosing an appropriate infection model to study quorum sensing inhibition in Pseudomonas infections.
  Journal
Int J Mol Sci 14:19309-40 (2013)
DOI:10.3390/ijms140919309
Reference
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Heeb S, Fletcher MP, Chhabra SR, Diggle SP, Williams P, Camara M
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Quinolones: from antibiotics to autoinducers.
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FEMS Microbiol Rev 35:247-74 (2011)
DOI:10.1111/j.1574-6976.2010.00247.x
Reference
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Rasamiravaka T, Labtani Q, Duez P, El Jaziri M
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The formation of biofilms by Pseudomonas aeruginosa: a review of the natural and synthetic compounds interfering with control mechanisms.
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Biomed Res Int 2015:759348 (2015)
DOI:10.1155/2015/759348
Reference
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Whiteley M, Greenberg EP
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Promoter specificity elements in Pseudomonas aeruginosa quorum-sensing-controlled genes.
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J Bacteriol 183:5529-34 (2001)
DOI:10.1128/JB.183.19.5529-5534.2001
Reference
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Chin-A-Woeng TF, van den Broek D, de Voer G, van der Drift KM, Tuinman S, Thomas-Oates JE, Lugtenberg BJ, Bloemberg GV
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Phenazine-1-carboxamide production in the biocontrol strain Pseudomonas chlororaphis PCL1391 is regulated by multiple factors secreted into the growth medium.
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Mol Plant Microbe Interact 14:969-79 (2001)
DOI:10.1094/MPMI.2001.14.8.969
Reference
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Hughes DT, Clarke MB, Yamamoto K, Rasko DA, Sperandio V
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The QseC adrenergic signaling cascade in Enterohemorrhagic E. coli (EHEC).
  Journal
PLoS Pathog 5:e1000553 (2009)
DOI:10.1371/journal.ppat.1000553
Reference
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Njoroge J, Sperandio V
  Title
Enterohemorrhagic Escherichia coli virulence regulation by two bacterial adrenergic kinases, QseC and QseE.
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Infect Immun 80:688-703 (2012)
DOI:10.1128/IAI.05921-11
Reference
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Pacheco AR, Curtis MM, Ritchie JM, Munera D, Waldor MK, Moreira CG, Sperandio V
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Fucose sensing regulates bacterial intestinal colonization.
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Nature 492:113-7 (2012)
DOI:10.1038/nature11623
Reference
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Hirakawa H, Harwood CS, Pechter KB, Schaefer AL, Greenberg EP
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Antisense RNA that affects Rhodopseudomonas palustris quorum-sensing signal receptor expression.
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Proc Natl Acad Sci U S A 109:12141-6 (2012)
DOI:10.1073/pnas.1200243109
Reference
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Danino VE, Wilkinson A, Edwards A, Downie JA
  Title
Recipient-induced transfer of the symbiotic plasmid pRL1JI in Rhizobium leguminosarum bv. viciae is regulated by a quorum-sensing relay.
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Mol Microbiol 50:511-25 (2003)
DOI:10.1046/j.1365-2958.2003.03699.x
Reference
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Quorum-sensing in Rhizobium.
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Antonie Van Leeuwenhoek 81:397-407 (2002)
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Reference
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Rodelas B, Lithgow JK, Wisniewski-Dye F, Hardman A, Wilkinson A, Economou A, Williams P, Downie JA
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Analysis of quorum-sensing-dependent control of rhizosphere-expressed (rhi) genes in Rhizobium leguminosarum bv. viciae.
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J Bacteriol 181:3816-23 (1999)
DOI:10.1128/JB.181.12.3816-3823.1999
Reference
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Lang J, Faure D
  Title
Functions and regulation of quorum-sensing in Agrobacterium tumefaciens.
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Front Plant Sci 5:14 (2014)
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Reference
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Planamente S, Morera S, Faure D
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In planta fitness-cost of the Atu4232-regulon encoding for a selective GABA-binding sensor in Agrobacterium.
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Commun Integr Biol 6:e23692 (2013)
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Reference
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Barnard AM, Salmond GP
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Quorum sensing in Erwinia species.
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Anal Bioanal Chem 387:415-23 (2007)
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Reference
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Quorum sensing, virulence and secondary metabolite production in plant soft-rotting bacteria.
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Philos Trans R Soc Lond B Biol Sci 362:1165-83 (2007)
DOI:10.1098/rstb.2007.2042
Reference
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Carlier A, Burbank L, von Bodman SB
  Title
Identification and characterization of three novel EsaI/EsaR quorum-sensing controlled stewartan exopolysaccharide biosynthetic genes in Pantoea stewartii ssp. stewartii.
  Journal
Mol Microbiol 74:903-13 (2009)
DOI:10.1111/j.1365-2958.2009.06906.x
Reference
PMID:7665477
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Beck von Bodman S, Farrand SK
  Title
Capsular polysaccharide biosynthesis and pathogenicity in Erwinia stewartii require induction by an N-acylhomoserine lactone autoinducer.
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J Bacteriol 177:5000-8 (1995)
DOI:10.1128/JB.177.17.5000-5008.1995
Reference
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O'Grady EP, Viteri DF, Malott RJ, Sokol PA
  Title
Reciprocal regulation by the CepIR and CciIR quorum sensing systems in Burkholderia cenocepacia.
  Journal
BMC Genomics 10:441 (2009)
DOI:10.1186/1471-2164-10-441
Reference
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Malott RJ, Baldwin A, Mahenthiralingam E, Sokol PA
  Title
Characterization of the cciIR quorum-sensing system in Burkholderia cenocepacia.
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Infect Immun 73:4982-92 (2005)
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Reference
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Deng Y, Schmid N, Wang C, Wang J, Pessi G, Wu D, Lee J, Aguilar C, Ahrens CH, Chang C, Song H, Eberl L, Zhang LH
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Cis-2-dodecenoic acid receptor RpfR links quorum-sensing signal perception with regulation of virulence through cyclic dimeric guanosine monophosphate turnover.
  Journal
Proc Natl Acad Sci U S A 109:15479-84 (2012)
DOI:10.1073/pnas.1205037109
Reference
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Suppiger A, Schmid N, Aguilar C, Pessi G, Eberl L
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Two quorum sensing systems control biofilm formation and virulence in members of the Burkholderia cepacia complex.
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Virulence 4:400-9 (2013)
DOI:10.4161/viru.25338
Reference
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Deng Y, Wu J, Tao F, Zhang LH
  Title
Listening to a new language: DSF-based quorum sensing in Gram-negative bacteria.
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Chem Rev 111:160-73 (2011)
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Communication with a growing family: diffusible signal factor (DSF) signaling in bacteria.
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Trends Microbiol 19:145-52 (2011)
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Reference
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Kim J, Kim JG, Kang Y, Jang JY, Jog GJ, Lim JY, Kim S, Suga H, Nagamatsu T, Hwang I
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Quorum sensing and the LysR-type transcriptional activator ToxR regulate toxoflavin biosynthesis and transport in Burkholderia glumae.
  Journal
Mol Microbiol 54:921-34 (2004)
DOI:10.1111/j.1365-2958.2004.04338.x
Reference
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Kim J, Kang Y, Choi O, Jeong Y, Jeong JE, Lim JY, Kim M, Moon JS, Suga H, Hwang I
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Regulation of polar flagellum genes is mediated by quorum sensing and FlhDC in Burkholderia glumae.
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Mol Microbiol 64:165-79 (2007)
DOI:10.1111/j.1365-2958.2007.05646.x
Reference
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Stauff DL, Bassler BL
  Title
Quorum sensing in Chromobacterium violaceum: DNA recognition and gene regulation by the CviR receptor.
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J Bacteriol 193:3871-8 (2011)
DOI:10.1128/JB.05125-11
Reference
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Chen G, Swem LR, Swem DL, Stauff DL, O'Loughlin CT, Jeffrey PD, Bassler BL, Hughson FM
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A strategy for antagonizing quorum sensing.
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Mol Cell 42:199-209 (2011)
DOI:10.1016/j.molcel.2011.04.003
Reference
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Hao G, Burr TJ
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Regulation of long-chain N-acyl-homoserine lactones in Agrobacterium vitis.
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J Bacteriol 188:2173-83 (2006)
DOI:10.1128/JB.188.6.2173-2183.2006
Reference
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Savka MA, Le PT, Burr TJ
  Title
LasR receptor for detection of long-chain quorum-sensing signals: identification of N-acyl-homoserine lactones encoded by the avsI locus of Agrobacterium vitis.
  Journal
Curr Microbiol 62:101-10 (2011)
DOI:10.1007/s00284-010-9679-1
Reference
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Le KY, Otto M
  Title
Quorum-sensing regulation in staphylococci-an overview.
  Journal
Front Microbiol 6:1174 (2015)
DOI:10.3389/fmicb.2015.01174
Reference
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Queck SY, Jameson-Lee M, Villaruz AE, Bach TH, Khan BA, Sturdevant DE, Ricklefs SM, Li M, Otto M
  Title
RNAIII-independent target gene control by the agr quorum-sensing system: insight into the evolution of virulence regulation in Staphylococcus aureus.
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Mol Cell 32:150-8 (2008)
DOI:10.1016/j.molcel.2008.08.005
Reference
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Darkoh C, DuPont HL, Norris SJ, Kaplan HB
  Title
Toxin synthesis by Clostridium difficile is regulated through quorum signaling.
  Journal
MBio 6:e02569 (2015)
DOI:10.1128/mBio.02569-14
Reference
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Vidal JE, Shak JR, Canizalez-Roman A
  Title
The CpAL quorum sensing system regulates production of hemolysins CPA and PFO to build Clostridium perfringens biofilms.
  Journal
Infect Immun 83:2430-42 (2015)
DOI:10.1128/IAI.00240-15
Reference
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Ohtani K, Yuan Y, Hassan S, Wang R, Wang Y, Shimizu T
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Virulence gene regulation by the agr system in Clostridium perfringens.
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J Bacteriol 191:3919-27 (2009)
DOI:10.1128/JB.01455-08
Reference
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Li YH, Tian X
  Title
Quorum sensing and bacterial social interactions in biofilms.
  Journal
Sensors (Basel) 12:2519-38 (2012)
DOI:10.3390/s120302519
Reference
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Berg KH, Biornstad TJ, Johnsborg O, Havarstein LS
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Properties and biological role of streptococcal fratricins.
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Appl Environ Microbiol 78:3515-22 (2012)
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Reference
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Comparing the cariogenic species Streptococcus sobrinus and S. mutans on whole genome level.
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J Oral Microbiol 6:26189 (2014)
DOI:10.3402/jom.v6.26189
Reference
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Jimenez JC, Federle MJ
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Quorum sensing in group A Streptococcus.
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Front Cell Infect Microbiol 4:127 (2014)
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Reference
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Cook LC, Federle MJ
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Peptide pheromone signaling in Streptococcus and Enterococcus.
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FEMS Microbiol Rev 38:473-92 (2014)
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Reference
PMID:9680220
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The group A streptococcal dipeptide permease (Dpp) is involved in the uptake of essential amino acids and affects the expression of cysteine protease.
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Reference
PMID:8885277
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Molecular characterization of group A streptococcal (GAS) oligopeptide permease (opp) and its effect on cysteine protease production.
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Mol Microbiol 21:1087-99 (1996)
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Reference
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Anbalagan S, Dmitriev A, McShan WM, Dunman PM, Chaussee MS
  Title
Growth phase-dependent modulation of Rgg binding specificity in Streptococcus pyogenes.
  Journal
J Bacteriol 194:3961-71 (2012)
DOI:10.1128/JB.06709-11
Reference
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Clewell DB
  Title
Tales of conjugation and sex pheromones: A plasmid and enterococcal odyssey.
  Journal
Mob Genet Elements 1:38-54 (2011)
DOI:10.4161/mge.1.1.15409
Reference
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Wardal E, Sadowy E, Hryniewicz W
  Title
Complex nature of enterococcal pheromone-responsive plasmids.
  Journal
Pol J Microbiol 59:79-87 (2010)
Reference
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Roux A, Payne SM, Gilmore MS
  Title
Microbial telesensing: probing the environment for friends, foes, and food.
  Journal
Cell Host Microbe 6:115-24 (2009)
DOI:10.1016/j.chom.2009.07.004
Reference
  Authors
Slamti L, Perchat S, Huillet E, Lereclus D
  Title
Quorum sensing in Bacillus thuringiensis is required for completion of a full infectious cycle in the insect.
  Journal
Toxins (Basel) 6:2239-55 (2014)
DOI:10.3390/toxins6082239
Reference
  Authors
Lopez D, Kolter R
  Title
Extracellular signals that define distinct and coexisting cell fates in Bacillus subtilis.
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FEMS Microbiol Rev 34:134-49 (2010)
DOI:10.1111/j.1574-6976.2009.00199.x
Reference
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Stephenson S, Mueller C, Jiang M, Perego M
  Title
Molecular analysis of Phr peptide processing in Bacillus subtilis.
  Journal
J Bacteriol 185:4861-71 (2003)
DOI:10.1128/JB.185.16.4861-4871.2003
Reference
  Authors
Lanigan-Gerdes S, Dooley AN, Faull KF, Lazazzera BA
  Title
Identification of subtilisin, Epr and Vpr as enzymes that produce CSF, an extracellular signalling peptide of Bacillus subtilis.
  Journal
Mol Microbiol 65:1321-33 (2007)
DOI:10.1111/j.1365-2958.2007.05869.x
Reference
  Authors
Kleerebezem M
  Title
Quorum sensing control of lantibiotic production; nisin and subtilin autoregulate their own biosynthesis.
  Journal
Peptides 25:1405-14 (2004)
DOI:10.1016/j.peptides.2003.10.021
Reference
  Authors
Rutherford ST, Bassler BL
  Title
Bacterial quorum sensing: its role in virulence and possibilities for its control.
  Journal
Cold Spring Harb Perspect Med 2:a012427 (2012)
DOI:10.1101/cshperspect.a012427
Reference
  Authors
LaSarre B, Federle MJ
  Title
Exploiting quorum sensing to confuse bacterial pathogens.
  Journal
Microbiol Mol Biol Rev 77:73-111 (2013)
DOI:10.1128/MMBR.00046-12
Reference
  Authors
Sifri CD
  Title
Healthcare epidemiology: quorum sensing: bacteria talk sense.
  Journal
Clin Infect Dis 47:1070-6 (2008)
DOI:10.1086/592072
Related
pathway
ecok02040  Flagellar assembly
KO pathway
ko02024   
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