KEGG   PATHWAY: egr03022
Entry
egr03022                    Pathway                                
Name
Basal transcription factors - Eucalyptus grandis (rose gum)
Class
Genetic Information Processing; Transcription
Pathway map
egr03022  Basal transcription factors
egr03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Eucalyptus grandis (rose gum) [GN:egr]
Gene
104422474  transcription initiation factor IIA large subunit [KO:K03122]
104448037  transcription initiation factor IIA subunit 2 [KO:K03123]
104444836  transcription initiation factor IIB-2 [KO:K03124]
104418814  transcription initiation factor IIB-2 [KO:K03124]
104456868  plant-specific TFIIB-related protein 1 [KO:K03124]
104422271  LOW QUALITY PROTEIN: TATA-box-binding protein [KO:K03120]
104425251  TATA-box-binding protein [KO:K03120]
104419885  transcription initiation factor TFIID subunit 1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
104426099  transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
104433780  transcription initiation factor TFIID subunit 7 [KO:K03132]
104439595  transcription initiation factor TFIID subunit 8 [KO:K14649]
104422026  transcription initiation factor TFIID subunit 8 [KO:K14649]
104441249  transcription initiation factor TFIID subunit 8 [KO:K14649]
104433433  transcription initiation factor TFIID subunit 10 [KO:K03134]
104437599  transcription initiation factor TFIID subunit 5 isoform X1 [KO:K03130]
104449278  transcription initiation factor TFIID subunit 4b isoform X1 [KO:K03129]
120292137  transcription initiation factor TFIID subunit 4b-like isoform X1 [KO:K03129]
120294596  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4b [KO:K03129]
104450011  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12b [KO:K03126]
104425654  transcription initiation factor TFIID subunit 12 [KO:K03126]
104448176  transcription initiation factor TFIID subunit 6 [KO:K03131]
104424687  transcription initiation factor TFIID subunit 6 [KO:K03131]
120286021  transcription initiation factor TFIID subunit 6-like isoform X1 [KO:K03131]
104414134  transcription initiation factor TFIID subunit 9 [KO:K03133]
104454665  transcription initiation factor TFIID subunit 9 [KO:K03133]
104455414  transcription initiation factor TFIID subunit 11 [KO:K03135]
104435930  transcription initiation factor TFIID subunit 13 [KO:K03127]
104421424  transcription initiation factor IIE subunit alpha [KO:K03136]
104441779  general transcription factor IIE subunit 2 [KO:K03137]
120286494  uncharacterized protein LOC120286494 [KO:K03137]
104445649  transcription initiation factor IIF subunit alpha isoform X1 [KO:K03138]
104448976  transcription initiation factor IIF subunit beta isoform X1 [KO:K03139] [EC:5.6.2.-]
104454199  general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
104422047  general transcription and DNA repair factor IIH subunit TFB1-1 [KO:K03141]
104421682  general transcription factor IIH subunit 2 [KO:K03142]
104453007  general transcription and DNA repair factor IIH subunit TFB4 [KO:K03143]
104445290  general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [KO:K03144]
104443830  general transcription and DNA repair factor IIH helicase subunit XPB1 [KO:K10843] [EC:5.6.2.4]
104426669  general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
104443736  general transcription and DNA repair factor IIH subunit TFB5 [KO:K10845]
104425813  cyclin-dependent kinase D-3 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
104429702  uncharacterized protein LOC104429702 [KO:K10842]
104432304  cyclin-H1-1 isoform X1 [KO:K06634]
104414823  uncharacterized protein LOC104414823 isoform X3 [KO:K06634]
120285977  uncharacterized protein LOC120285977 isoform X1 [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
egr03020  RNA polymerase
egr03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

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