KEGG   PATHWAY: gpb00010
Entry
gpb00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Gamma proteobacterium HdN1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
gpb00010  Glycolysis / Gluconeogenesis
gpb00010

Module
gpb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:gpb00010]
gpb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gpb00010]
gpb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gpb00010]
Other DBs
GO: 0006096 0006094
Organism
Gamma proteobacterium HdN1 [GN:gpb]
Gene
HDN1F_34670  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HDN1F_31890  cbbfC; Fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
HDN1F_36430  fba; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
HDN1F_08610  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
HDN1F_15040  gap; Glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HDN1F_33020  gap; Glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
HDN1F_36450  Glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HDN1F_36440  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HDN1F_07300  gpmI; Phosphoglyceromutase [KO:K15633] [EC:5.4.2.12]
HDN1F_28590  eno; Enolase (2-phosphoglycerate dehydratase) [KO:K01689] [EC:4.2.1.11]
HDN1F_15030  pykA; Pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
HDN1F_16850  ppsA; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
HDN1F_07690  aceE; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
HDN1F_07700  aceF; pyruvate dehydrogenase, E2 component [KO:K00627] [EC:2.3.1.12]
HDN1F_15620  lpdG; 2-oxoglutarate dehydrogenase, lipoamide dehydrogenase subunit [KO:K00382] [EC:1.8.1.4]
HDN1F_09550  korA; 2-ketoglutarate: nadp oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
HDN1F_09560  korB; 2-ketoglutarate: NADP oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
HDN1F_08500  adhC; Zn-dependent alcohol dehydrogenases, class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
HDN1F_20690  Predicted iron-containing alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
HDN1F_22830  yahK; zinc-type alcohol dehydrogenase-like protein YahK [KO:K13979] [EC:1.1.1.2]
HDN1F_26850  Aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
HDN1F_19980  acsA; Acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
HDN1F_05220  manB; Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
HDN1F_18980  pckA; Phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
gpb00020  Citrate cycle (TCA cycle)
gpb00030  Pentose phosphate pathway
gpb00500  Starch and sucrose metabolism
gpb00620  Pyruvate metabolism
gpb00640  Propanoate metabolism
gpb00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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