KEGG   PATHWAY: halx00030
Entry
halx00030                   Pathway                                
Name
Pentose phosphate pathway - Halorussus limi
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
halx00030  Pentose phosphate pathway
halx00030

Module
halx_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:halx00030]
Other DBs
GO: 0006098
Organism
Halorussus limi [GN:halx]
Gene
M0R89_04190  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
M0R89_08310  NAD(P)-dependent oxidoreductase [KO:K19243] [EC:1.1.1.388]
M0R89_08135  gnd; decarboxylating 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
M0R89_05455  rpiA; ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
M0R89_03615  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
M0R89_13380  phosphopentomutase/phosphoglucosamine mutase [KO:K22199] [EC:5.4.2.7]
M0R89_07625  glmM; phosphoglucosamine mutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
M0R89_03350  carbohydrate kinase family protein [KO:K26208] [EC:2.7.1.239]
M0R89_03730  ribose 1,5-bisphosphate isomerase [KO:K18237] [EC:5.3.1.29]
M0R89_07615  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
M0R89_14390  aldehyde dehydrogenase family protein [KO:K18978] [EC:1.2.1.90]
M0R89_07245  SDR family oxidoreductase [KO:K00034] [EC:1.1.1.47]
M0R89_20385  glucose 1-dehydrogenase [KO:K22969] [EC:1.1.1.47]
M0R89_12635  glucose 1-dehydrogenase [KO:K22969] [EC:1.1.1.47]
M0R89_16915  GMC family oxidoreductase [KO:K19813] [EC:1.1.5.9]
M0R89_18585  GMC family oxidoreductase [KO:K06151] [EC:1.1.99.3]
M0R89_18580  gluconate 2-dehydrogenase subunit 3 family protein [KO:K06152] [EC:1.1.99.3]
M0R89_12595  mandelate racemase/muconate lactonizing enzyme family protein [KO:K05308] [EC:4.2.1.140]
M0R89_08040  sugar kinase [KO:K00874] [EC:2.7.1.45]
M0R89_03510  aldehyde ferredoxin oxidoreductase family protein [KO:K03738] [EC:1.2.7.5]
M0R89_04790  aldehyde ferredoxin oxidoreductase [KO:K03738] [EC:1.2.7.5]
M0R89_04860  aldehyde ferredoxin oxidoreductase [KO:K03738] [EC:1.2.7.5]
M0R89_21240  DUF4147 domain-containing protein [KO:K11529] [EC:2.7.1.165]
M0R89_16705  class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
M0R89_11070  2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
M0R89_16700  fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
halx00010  Glycolysis / Gluconeogenesis
halx00040  Pentose and glucuronate interconversions
halx00052  Galactose metabolism
halx00230  Purine metabolism
halx00240  Pyrimidine metabolism
halx00340  Histidine metabolism
halx00630  Glyoxylate and dicarboxylate metabolism
halx00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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