KEGG   PATHWAY: haxy00630
Entry
haxy00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Halorussus vallis
Class
Metabolism; Carbohydrate metabolism
Pathway map
haxy00630  Glyoxylate and dicarboxylate metabolism
haxy00630

Module
haxy_M00621  Glycine cleavage system [PATH:haxy00630]
haxy_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:haxy00630]
Other DBs
GO: 0046487 0043648
Organism
Halorussus vallis [GN:haxy]
Gene
NGM07_02040  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
NGM07_03790  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
NGM07_04005  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
NGM07_14430  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NGM07_17445  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
NGM07_19515  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NGM07_11915  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NGM07_14160  lactate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NGM07_15955  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
NGM07_14570  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
NGM07_02075  thiolase family protein [KO:K00626] [EC:2.3.1.9]
NGM07_03585  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
NGM07_12705  thiolase family protein [KO:K00626] [EC:2.3.1.9]
NGM07_22815  thiolase family protein [KO:K00626] [EC:2.3.1.9]
NGM07_03800  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
NGM07_17930  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
NGM07_01235  VOC family protein [KO:K05606] [EC:5.1.99.1]
NGM07_16995  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
NGM07_04615  acyl dehydratase [KO:K14449] [EC:4.2.1.148]
NGM07_05305  acetyl-CoA carboxylase biotin carboxylase subunit [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
NGM07_05350  acyl-CoA carboxylase subunit beta [KO:K19312] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
NGM07_05345  acc operon protein [KO:K22568] [EC:6.4.1.2 6.4.1.3]
NGM07_00625  cobalamin B12-binding domain-containing protein [KO:K01849] [EC:5.4.99.2]
NGM07_17055  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
NGM07_19495  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
NGM07_04605  methylaspartate mutase subunit E [KO:K19268] [EC:5.4.99.1]
NGM07_04600  glmS; methylaspartate mutase subunit S [KO:K01846] [EC:5.4.99.1]
NGM07_04610  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
NGM07_04595  CoA transferase [KO:K19280] [EC:2.8.3.26]
NGM07_04620  aldolase/citrate lyase family protein [KO:K19281] [EC:4.1.3.24]
NGM07_05965  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
NGM07_07450  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
NGM07_03680  phosphoglycolate phosphatase [KO:K22223] [EC:3.1.3.18]
NGM07_03910  alanine--glyoxylate aminotransferase family protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
NGM07_18015  gltB; glutamate synthase large subunit [KO:K00284] [EC:1.4.7.1]
NGM07_10280  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
NGM07_05875  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NGM07_06220  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
NGM07_06215  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
NGM07_06230  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
NGM07_15160  aminomethyltransferase family protein [KO:K00605] [EC:2.1.2.10]
NGM07_12165  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NGM07_06225  gcvH; glycine cleavage system protein GcvH [KO:K02437]
NGM07_20690  DUF4147 domain-containing protein [KO:K11529] [EC:2.7.1.165]
NGM07_08745  aldA; aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
NGM07_12120  class II aldolase/adducin family protein [KO:K01636] [EC:4.1.2.-]
NGM07_06790  molybdopterin-dependent oxidoreductase [KO:K00123] [EC:1.17.1.9]
NGM07_09320  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
haxy00010  Glycolysis / Gluconeogenesis
haxy00020  Citrate cycle (TCA cycle)
haxy00030  Pentose phosphate pathway
haxy00053  Ascorbate and aldarate metabolism
haxy00071  Fatty acid degradation
haxy00230  Purine metabolism
haxy00250  Alanine, aspartate and glutamate metabolism
haxy00260  Glycine, serine and threonine metabolism
haxy00620  Pyruvate metabolism
haxy00710  Carbon fixation by Calvin cycle
haxy00750  Vitamin B6 metabolism
haxy00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system