KEGG   PATHWAY: hazp00030
Entry
hazp00030                   Pathway                                
Name
Pentose phosphate pathway - Halomicrobium sp. ZPS1
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
hazp00030  Pentose phosphate pathway
hazp00030

Module
hazp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:hazp00030]
hazp_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:hazp00030]
hazp_M00308  Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P [PATH:hazp00030]
hazp_M00968  Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:hazp00030]
Other DBs
GO: 0006098
Organism
Halomicrobium sp. ZPS1 [GN:hazp]
Gene
GBQ70_09745  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
GBQ70_06030  NAD-dependent epimerase/dehydratase family protein [KO:K19243] [EC:1.1.1.388]
GBQ70_00465  beta-propeller fold lactonase family protein [KO:K07404] [EC:3.1.1.31]
GBQ70_05315  NADP-dependent phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
GBQ70_08840  rpiA; ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
GBQ70_10745  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
GBQ70_01005  phosphomannomutase [KO:K22199] [EC:5.4.2.7]
GBQ70_07435  glmM; phosphoglucosamine mutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
GBQ70_01120  carbohydrate kinase family protein [KO:K26208] [EC:2.7.1.239]
GBQ70_01105  ribose 1,5-bisphosphate isomerase [KO:K18237] [EC:5.3.1.29]
GBQ70_07715  prs; ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
GBQ70_09310  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
GBQ70_14510  alcohol dehydrogenase catalytic domain-containing protein [KO:K22969] [EC:1.1.1.47]
GBQ70_15040  FAD-binding protein [KO:K19813] [EC:1.1.5.9]
GBQ70_04885  mandelate racemase/muconate lactonizing enzyme family protein [KO:K05308] [EC:4.2.1.140]
GBQ70_14430  mandelate racemase/muconate lactonizing enzyme family protein [KO:K05308] [EC:4.2.1.140]
GBQ70_05165  sugar kinase [KO:K00874] [EC:2.7.1.45]
GBQ70_15705  sugar kinase [KO:K00874] [EC:2.7.1.45]
GBQ70_03785  aminotransferase class V-fold PLP-dependent enzyme [KO:K17468] [EC:4.3.1.29]
GBQ70_00605  aldolase [KO:K11645] [EC:4.1.2.13]
GBQ70_01830  aldolase [KO:K11645] [EC:4.1.2.13]
GBQ70_02445  fructose-bisphosphate aldolase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
GBQ70_01835  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
hazp00010  Glycolysis / Gluconeogenesis
hazp00040  Pentose and glucuronate interconversions
hazp00052  Galactose metabolism
hazp00230  Purine metabolism
hazp00240  Pyrimidine metabolism
hazp00340  Histidine metabolism
hazp00630  Glyoxylate and dicarboxylate metabolism
hazp00750  Vitamin B6 metabolism
KO pathway
ko00030   
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