KEGG   PATHWAY: hjt00030
Entry
hjt00030                    Pathway                                
Name
Pentose phosphate pathway - Natrinema thermotolerans
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
hjt00030  Pentose phosphate pathway
hjt00030

Module
hjt_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:hjt00030]
hjt_M00968  Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:hjt00030]
Other DBs
GO: 0006098
Organism
Natrinema thermotolerans [GN:hjt]
Gene
DVR14_06745  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DVR14_07215  NAD(P)-dependent oxidoreductase [KO:K19243] [EC:1.1.1.388]
DVR14_11805  gnd; decarboxylating 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
DVR14_09310  ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
DVR14_06740  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
DVR14_15285  phosphomannomutase [KO:K22199] [EC:5.4.2.7]
DVR14_09810  glmM; phosphoglucosamine mutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
DVR14_07580  carbohydrate kinase family protein [KO:K26208] [EC:2.7.1.239]
DVR14_07590  ribose 1,5-bisphosphate isomerase [KO:K18237] [EC:5.3.1.29]
DVR14_09795  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
DVR14_02090  aldehyde dehydrogenase [KO:K18978] [EC:1.2.1.90]
DVR14_17705  glucose dehydrogenase [KO:K22969] [EC:1.1.1.47]
DVR14_21835  glucose dehydrogenase [KO:K22969] [EC:1.1.1.47]
DVR14_13050  GMC family oxidoreductase [KO:K19813] [EC:1.1.5.9]
DVR14_18340  mandelate racemase/muconate lactonizing enzyme family protein [KO:K05308] [EC:4.2.1.140]
DVR14_18380  mandelate racemase/muconate lactonizing enzyme family protein [KO:K05308] [EC:4.2.1.140]
DVR14_22470  mandelate racemase/muconate lactonizing enzyme family protein [KO:K05308] [EC:4.2.1.140]
DVR14_22510  mandelate racemase/muconate lactonizing enzyme family protein [KO:K05308] [EC:4.2.1.140]
DVR14_12900  sugar kinase [KO:K00874] [EC:2.7.1.45]
DVR14_08075  aldehyde ferredoxin oxidoreductase [KO:K03738] [EC:1.2.7.5]
DVR14_05995  aldehyde ferredoxin oxidoreductase [KO:K03738] [EC:1.2.7.5]
DVR14_22795  aldehyde ferredoxin oxidoreductase [KO:K03738] [EC:1.2.7.5]
DVR14_18660  aldehyde ferredoxin oxidoreductase [KO:K03738] [EC:1.2.7.5]
DVR14_06180  DUF4147 domain-containing protein [KO:K11529] [EC:2.7.1.165]
DVR14_04445  aldolase [KO:K11645] [EC:4.1.2.13]
DVR14_06585  fructose-bisphosphate aldolase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
DVR14_04450  fructose-bisphosphatase class I [KO:K03841] [EC:3.1.3.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
hjt00010  Glycolysis / Gluconeogenesis
hjt00040  Pentose and glucuronate interconversions
hjt00052  Galactose metabolism
hjt00230  Purine metabolism
hjt00240  Pyrimidine metabolism
hjt00340  Histidine metabolism
hjt00630  Glyoxylate and dicarboxylate metabolism
hjt00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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