KEGG   PATHWAY: hni00630
Entry
hni00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Hyphomicrobium nitrativorans
Class
Metabolism; Carbohydrate metabolism
Pathway map
hni00630  Glyoxylate and dicarboxylate metabolism
hni00630

Module
hni_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:hni00630]
Other DBs
GO: 0046487 0043648
Organism
Hyphomicrobium nitrativorans [GN:hni]
Gene
W911_09440  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
W911_01195  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
W911_02285  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
W911_11220  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
W911_01805  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
W911_15815  succinyl-CoA synthetase subunit alpha [KO:K08692] [EC:6.2.1.9]
W911_15810  sucC; malate--CoA ligase subunit beta [KO:K14067] [EC:6.2.1.9]
W911_02960  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
W911_04560  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
W911_11550  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
W911_02955  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
W911_16090  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
W911_17400  crotonyl-CoA reductase [KO:K14446] [EC:1.3.1.85]
W911_15945  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
W911_17410  protein meaA [KO:K14447] [EC:5.4.99.63]
W911_17390  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
W911_01750  MaoC family dehydratase [KO:K14449] [EC:4.2.1.148]
W911_10365  aldolase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
W911_15805  Malyl-CoA lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
W911_08695  acetyl-CoA carboxylase [KO:K01965] [EC:6.4.1.3]
W911_01025  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
W911_15050  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
W911_15055  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
W911_05695  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
W911_05700  FAD-linked oxidase [KO:K11472] [EC:1.1.99.14]
W911_05705  2-hydroxy-acid oxidase [KO:K11473] [EC:1.1.99.14]
W911_07460  catalase [KO:K03781] [EC:1.11.1.6]
W911_13745  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
W911_11730  hypothetical protein [KO:K01091] [EC:3.1.3.18]
W911_10265  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
W911_03210  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
W911_15800  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
W911_09775  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
W911_10435  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
W911_10450  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
W911_09335  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
W911_01445  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
W911_14380  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
W911_16590  glycerate kinase [KO:K00865] [EC:2.7.1.165]
W911_07075  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
W911_08150  formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
W911_12760  NAD-dependent formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
W911_12770  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
W911_12775  formate dehydrogenase subunit beta [KO:K00124]
W911_12780  formate dehydrogenase subunit gamma [KO:K00127]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
hni00010  Glycolysis / Gluconeogenesis
hni00020  Citrate cycle (TCA cycle)
hni00030  Pentose phosphate pathway
hni00053  Ascorbate and aldarate metabolism
hni00071  Fatty acid degradation
hni00230  Purine metabolism
hni00250  Alanine, aspartate and glutamate metabolism
hni00260  Glycine, serine and threonine metabolism
hni00620  Pyruvate metabolism
hni00710  Carbon fixation by Calvin cycle
hni00750  Vitamin B6 metabolism
hni00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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