KEGG   PATHWAY: hsl00970
Entry
hsl00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Halobacterium salinarum R1
Class
Genetic Information Processing; Translation
Pathway map
hsl00970  Aminoacyl-tRNA biosynthesis
hsl00970

Organism
Halobacterium salinarum R1 [GN:hsl]
Gene
OE_tRNAAla3  tRNAAla3; tRNA-Ala [KO:K14218]
OE_tRNAAla4  tRNAAla4; tRNA-Ala [KO:K14218]
OE_tRNAAla2  tRNAAla2; tRNA-Ala [KO:K14218]
OE_tRNAAla1  tRNAAla1; tRNA-Ala [KO:K14218]
OE_tRNAArg1  tRNAArg1; tRNA-Arg [KO:K14219]
OE_tRNAArg5  tRNAArg5; tRNA-Arg [KO:K14219]
OE_tRNAArg3  tRNAArg3; tRNA-Arg [KO:K14219]
OE_tRNAArg2  tRNAArg2; tRNA-Arg [KO:K14219]
OE_tRNAArg4  tRNAArg4; tRNA-Arg [KO:K14219]
OE_tRNAAsn  tRNAAsn; tRNA-Asn [KO:K14220]
OE_tRNAAsp  tRNAAsp; tRNA-Asp [KO:K14221]
OE_tRNACys  tRNACys; tRNA-Cys [KO:K14222]
OE_tRNAGln2  tRNAGln2; tRNA-Gln [KO:K14223]
OE_tRNAGln1  tRNAGln1; tRNA-Gln [KO:K14223]
OE_tRNAGlu2  tRNAGlu2; tRNA-Glu [KO:K14224]
OE_tRNAGlu1  tRNAGlu1; tRNA-Glu [KO:K14224]
OE_tRNAGly1  tRNAGly1; tRNA-Gly [KO:K14225]
OE_tRNAGly2  tRNAGly2; tRNA-Gly [KO:K14225]
OE_tRNAGly3  tRNAGly3; tRNA-Gly [KO:K14225]
OE_tRNAHis  tRNAHis; tRNA-His [KO:K14226]
OE_tRNAIle  tRNAIle; tRNA-Ile [KO:K14227]
OE_tRNALeu5  tRNALeu5; tRNA-Leu [KO:K14228]
OE_tRNALeu3  tRNALeu3; tRNA-Leu [KO:K14228]
OE_tRNALeu4  tRNALeu4; tRNA-Leu [KO:K14228]
OE_tRNALeu1  tRNALeu1; tRNA-Leu [KO:K14228]
OE_tRNALeu2  tRNALeu2; tRNA-Leu [KO:K14228]
OE_tRNALys1  tRNALys1; tRNA-Lys [KO:K14229]
OE_tRNALys2  tRNALys2; tRNA-Lys [KO:K14229]
OE_tRNAIniMet2  tRNAIniMet2; tRNA-Met [KO:K14230]
OE_tRNAMet  tRNAMet; tRNA-Met [KO:K14230]
OE_tRNAIniMet1  tRNAIniMet1; tRNA-Met [KO:K14230]
OE_tRNAPhe  tRNAPhe; tRNA-Phe [KO:K14231]
OE_tRNAPro2  tRNAPro2; tRNA-Pro [KO:K14232]
OE_tRNAPro3  tRNAPro3; tRNA-Pro [KO:K14232]
OE_tRNAPro1  tRNAPro1; tRNA-Pro [KO:K14232]
OE_tRNASer3  tRNASer3; tRNA-Ser [KO:K14233]
OE_tRNASer2  tRNASer2; tRNA-Ser [KO:K14233]
OE_tRNASer4  tRNASer4; tRNA-Ser [KO:K14233]
OE_tRNASer1  tRNASer1; tRNA-Ser [KO:K14233]
OE_tRNAThr2  tRNAThr2; tRNA-Thr [KO:K14234]
OE_tRNAThr1  tRNAThr1; tRNA-Thr [KO:K14234]
OE_tRNAThr3  tRNAThr3; tRNA-Thr [KO:K14234]
OE_tRNATrp  tRNATrp; tRNA-Trp [KO:K14235]
OE_tRNATyr  tRNATyr; tRNA-Tyr [KO:K14236]
OE_tRNAVal3  tRNAVal3; tRNA-Val [KO:K14237]
OE_tRNAVal2  tRNAVal2; tRNA-Val [KO:K14237]
OE_tRNAVal1  tRNAVal1; tRNA-Val [KO:K14237]
OE_2652F  gltS; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
OE_2284F  gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
OE_1522F  gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
OE_2283F  gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
OE_3591F  gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [KO:K09482] [EC:6.3.5.7]
OE_2929R  gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [KO:K03330] [EC:6.3.5.7]
OE_4198F  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
OE_1687F  aspS; aspartate--tRNA ligase [KO:K09759] [EC:6.1.1.23]
OE_4307F  glyS; glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
OE_3580R  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
OE_3893F  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
OE_2594F  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
OE_1496R  metS; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
OE_4572R  valS; valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
OE_4118R  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
OE_4068F  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
OE_3826F  lysS; lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
OE_5203F  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
OE_1595F  proS; proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
OE_3812R  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
OE_4505F  pheS; phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
OE_4507F  pheT; phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
OE_4139R  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
OE_4101R  trpS1; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
OE_4132R  trpS2; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
hsl00250  Alanine, aspartate and glutamate metabolism
hsl00260  Glycine, serine and threonine metabolism
hsl00270  Cysteine and methionine metabolism
hsl00290  Valine, leucine and isoleucine biosynthesis
hsl00300  Lysine biosynthesis
hsl00330  Arginine and proline metabolism
hsl00340  Histidine metabolism
hsl00380  Tryptophan metabolism
hsl00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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