PATHWAY: kor00240 Help Entry kor00240                    Pathway                                 Name Pyrimidine metabolism - Kosakonia oryzae Class Metabolism; Nucleotide metabolism BRITE hierarchy Pathway map kor00240   Pyrimidine metabolism Ortholog table Module kor_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:kor00240] kor_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:kor00240] kor_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:kor00240] kor_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:kor00240] kor_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:kor00240] kor_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:kor00240] Other DBs GO:  0006220 0006213 Organism Kosakonia oryzae [GN:kor] Gene AWR26_21270   carB; carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5] AWR26_21275   carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5] AWR26_22440   pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2] AWR26_22445   pyrI; aspartate carbamoyltransferase regulatory subunit [KO:K00610] AWR26_15640   pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3] AWR26_22525   amidohydrolase/deacetylase family metallohydrolase [KO:K01465] [EC:3.5.2.3] AWR26_16295   pyrD; quinone-dependent dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2] AWR26_00465   pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10] AWR26_11900   pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23] AWR26_20665   pyrH; UMP kinase [KO:K09903] [EC:2.7.4.22] AWR26_06795   ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6] AWR26_20340   mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9] AWR26_02400   maf; septum formation inhibitor Maf [KO:K06287] [EC:3.6.1.-] AWR26_03060   M48 family metallopeptidase [KO:K07043] [EC:3.6.1.-] AWR26_20335   pyrG; CTP synthase (glutamine hydrolyzing) [KO:K01937] [EC:6.3.4.2] AWR26_16435   cmk; (d)CMP kinase [KO:K00945] [EC:2.7.4.25] AWR26_14900   pyrimidine (deoxy)nucleoside triphosphate diphosphatase [KO:K08320] [EC:3.6.1.65] AWR26_08825   udk; uridine kinase [KO:K00876] [EC:2.7.1.48] AWR26_18960   bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45] AWR26_08540   surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6] AWR26_04780   surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6] AWR26_17745   HAD-IIA family hydrolase [KO:K02566] [EC:3.1.3.5] AWR26_21515   yjjG; pyrimidine 5'-nucleotidase [KO:K08723] [EC:3.1.3.-] AWR26_24020   udp; uridine phosphorylase [KO:K00757] [EC:2.4.2.3] AWR26_19590   ppnP; pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2] AWR26_06940   upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9] AWR26_22695   bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6] AWR26_21285   rihC; ribonucleoside hydrolase RihC [KO:K12700] [EC:3.2.2.-] AWR26_20405   LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-] AWR26_08515   cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5] AWR26_01860   cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21] AWR26_07790   codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21] AWR26_22475   nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6] AWR26_08830   dcd; dCTP deaminase [KO:K01494] [EC:3.5.4.13] AWR26_05670   nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1] AWR26_08240   nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1] AWR26_05665   nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1] AWR26_08235   nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1] AWR26_08060   yfbR; 5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89] AWR26_15450   dTMP kinase [KO:K00943] [EC:2.7.4.9] AWR26_00475   dut; dUTP diphosphatase [KO:K01520] [EC:3.6.1.23] AWR26_21475   deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4] AWR26_11700   tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21] AWR26_04620   thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45] AWR26_18465   NAD(P)-dependent oxidoreductase [KO:K17722] [EC:1.3.1.1] AWR26_18470   preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [KO:K17723] [EC:1.3.1.1] AWR26_18475   hydA; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2] AWR26_18480   Zn-dependent hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87] AWR26_07360   Zn-dependent hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87] AWR26_15860   rutA; pyrimidine utilization protein A [KO:K09018] [EC:1.14.99.46] AWR26_15885   rutF; pyrimidine utilization flavin reductase protein F [KO:K09024] [EC:1.5.1.-] AWR26_15865   rutB; pyrimidine utilization protein B [KO:K09020] [EC:3.5.1.110] AWR26_15870   rutC; pyrimidine utilization protein C [KO:K09021] AWR26_15875   rutD; pyrimidine utilization protein D [KO:K09023] [EC:3.5.1.-] AWR26_13620   ydfG; bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG [KO:K16066] [EC:1.1.1.381 1.1.1.-] AWR26_15880   malonic semialdehyde reductase [KO:K09019] [EC:1.1.1.-] Compound C00015   UDP C00039   DNA C00046   RNA C00055   CMP C00063   CTP C00064   L-Glutamine C00075   UTP C00086   Urea C00099   beta-Alanine C00105   UMP C00106   Uracil C00112   CDP C00119   5-Phospho-alpha-D-ribose 1-diphosphate C00169   Carbamoyl phosphate C00178   Thymine C00214   Thymidine C00222   3-Oxopropanoate C00239   dCMP C00295   Orotate C00299   Uridine C00337   (S)-Dihydroorotate C00363   dTDP C00364   dTMP C00365   dUMP C00380   Cytosine C00383   Malonate C00429   5,6-Dihydrouracil C00438   N-Carbamoyl-L-aspartate C00458   dCTP C00459   dTTP C00460   dUTP C00475   Cytidine C00526   Deoxyuridine C00672   2-Deoxy-D-ribose 1-phosphate C00705   dCDP C00813   Barbiturate C00881   Deoxycytidine C00941   3',5'-Cyclic CMP C01013   3-Hydroxypropanoate C01103   Orotidine 5'-phosphate C01168   Pseudouridine 5'-phosphate C01205   (R)-3-Amino-2-methylpropanoate C01346   dUDP C01368   3'-UMP C01563   Carbamate C02067   Pseudouridine C02170   Methylmalonate C02354   2',3'-Cyclic CMP C02355   2',3'-Cyclic UMP C02376   5-Methylcytosine C02642   3-Ureidopropionate C03997   5-Hydroxymethyldeoxycytidylate C05281   5-Methylbarbiturate C05822   3'-CMP C06198   P1,P4-Bis(5'-uridyl) tetraphosphate C11038   2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate C11039   2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate C15607   3-Oxo-3-ureidopropanoate C20231   (Z)-3-Ureidoacrylate peracid C20249   (Z)-3-Peroxyaminoacrylate C20253   Aminoacrylate C20254   Ureidoacrylate C20846   3-Oxo-3-ureidoisobutyrate C21028   (R)-5,6-Dihydrothymine C21029   (R)-3-Ureidoisobutyrate C22509   3',5'-Cyclic UMP Related pathway kor00030   Pentose phosphate pathway kor00220   Arginine biosynthesis kor00250   Alanine, aspartate and glutamate metabolism kor00280   Valine, leucine and isoleucine degradation kor00410   beta-Alanine metabolism KO pathway ko00240     LinkDB All DBs

DBGET integrated database retrieval system