KEGG   PATHWAY: lem00010
Entry
lem00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Lysobacter enzymogenes M497-1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
lem00010  Glycolysis / Gluconeogenesis
lem00010

Module
lem_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lem00010]
lem_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lem00010]
lem_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lem00010]
lem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lem00010]
Other DBs
GO: 0006096 0006094
Organism
Lysobacter enzymogenes M497-1 [GN:lem]
Gene
LEN_1452  glkA; glucokinase [KO:K00845] [EC:2.7.1.2]
LEN_2256  glucokinase [KO:K00845] [EC:2.7.1.2]
LEN_4841  glucokinase [KO:K00845] [EC:2.7.1.2]
LEN_1885  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
LEN_4096  pfkA; 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
LEN_0040  fbp; fructose-1,6-bisphosphatase I [KO:K03841] [EC:3.1.3.11]
LEN_3967  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
LEN_2882  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
LEN_3986  gap; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
LEN_3975  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
LEN_4671  phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
LEN_3474  eno; enolase [KO:K01689] [EC:4.2.1.11]
LEN_3970  pykA; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
LEN_2156  pyruvate, water dikinase [KO:K01007] [EC:2.7.9.2]
LEN_0510  pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
LEN_4270  bkdH; dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
LEN_2300  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
LEN_4268  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
LEN_4602  alcohol dehydrogenase class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
LEN_4277  NADP-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
LEN_0371  acsA; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
LEN_4688  manB; phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
LEN_0972  aldose 1-epimerase [KO:K01792] [EC:5.1.3.15]
LEN_3815  pckA; phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
lem00020  Citrate cycle (TCA cycle)
lem00030  Pentose phosphate pathway
lem00500  Starch and sucrose metabolism
lem00620  Pyruvate metabolism
lem00640  Propanoate metabolism
lem00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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