KEGG   PATHWAY: lrd00240
Entry
lrd00240                    Pathway                                
Name
Pyrimidine metabolism - Lolium rigidum (rigid ryegrass)
Class
Metabolism; Nucleotide metabolism
Pathway map
lrd00240  Pyrimidine metabolism
lrd00240

Module
lrd_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:lrd00240]
lrd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lrd00240]
lrd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lrd00240]
lrd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lrd00240]
Other DBs
GO: 0006220 0006213
Organism
Lolium rigidum (rigid ryegrass) [GN:lrd]
Gene
124660418  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
124653432  carbamoyl-phosphate synthase small chain, chloroplastic-like [KO:K01956] [EC:6.3.5.5]
124654494  carbamoyl-phosphate synthase small chain, chloroplastic-like [KO:K01956] [EC:6.3.5.5]
124682629  aspartate carbamoyltransferase, chloroplastic [KO:K00609] [EC:2.1.3.2]
124682822  aspartate carbamoyltransferase, chloroplastic-like [KO:K00609] [EC:2.1.3.2]
124665289  dihydroorotase, mitochondrial [KO:K01465] [EC:3.5.2.3]
124676786  dihydroorotate dehydrogenase (quinone), mitochondrial-like [KO:K00254] [EC:1.3.5.2]
124671091  dihydroorotate dehydrogenase (quinone), mitochondrial-like [KO:K00254] [EC:1.3.5.2]
124674041  dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
124665767  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
124665768  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
124667189  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
124667248  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
124665642  UMP-CMP kinase 1-like isoform X1 [KO:K13800] [EC:2.7.4.14]
124671229  UMP-CMP kinase 4-like isoform X1 [KO:K13800] [EC:2.7.4.14]
124671524  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
124671539  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
124673808  UMP-CMP kinase 3 [KO:K13800] [EC:2.7.4.14]
124660992  UMP-CMP kinase 1-like isoform X1 [KO:K13800] [EC:2.7.4.14]
124674970  UMP-CMP kinase 2-like isoform X1 [KO:K13800] [EC:2.7.4.14]
124675124  UMP-CMP kinase 3 [KO:K13800] [EC:2.7.4.14]
124676487  UMP-CMP kinase 2-like [KO:K13800] [EC:2.7.4.14]
124662110  uridylate kinase-like [KO:K09903] [EC:2.7.4.22]
124662232  uridylate kinase-like [KO:K09903] [EC:2.7.4.22]
124652387  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
124654352  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
124670324  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
124708896  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
124648080  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
124682549  probable apyrase 6 isoform X1 [KO:K01510] [EC:3.6.1.5]
124702510  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
124649809  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124681545  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124702375  probable apyrase 1 [KO:K14641] [EC:3.6.1.5]
124672972  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124673422  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124674141  probable apyrase 2 [KO:K14641] [EC:3.6.1.5]
124675726  probable apyrase 2 [KO:K14641] [EC:3.6.1.5]
124647286  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124649011  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124664908  ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124678945  venom phosphodiesterase 2-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124670070  ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124670147  venom phosphodiesterase 2-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124651223  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
124652214  CTP synthase-like isoform X1 [KO:K01937] [EC:6.3.4.2]
124667499  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
124702856  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
124660484  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
124706956  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
124706967  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
124707069  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
124649432  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
124692156  uridine kinase-like protein 3 [KO:K00876] [EC:2.7.1.48]
124651416  uridine/cytidine kinase UKL1, chloroplastic-like [KO:K00876] [EC:2.7.1.48]
124692965  inorganic pyrophosphatase TTM1-like [KO:K00876] [EC:2.7.1.48]
124652073  uridine/cytidine kinase UKL1, chloroplastic-like [KO:K00876] [EC:2.7.1.48]
124703546  uridine kinase-like protein 3 [KO:K00876] [EC:2.7.1.48]
124660182  uridine/cytidine kinase UKL1, chloroplastic [KO:K00876] [EC:2.7.1.48]
124665406  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
124677566  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
124665717  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
124654591  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
124660630  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
124664262  probable uridine nucleosidase 1 [KO:K01240] [EC:3.2.2.3]
124707574  uracil phosphoribosyltransferase-like [KO:K00761] [EC:2.4.2.9]
124707589  uracil phosphoribosyltransferase-like [KO:K00761] [EC:2.4.2.9]
124647145  uracil phosphoribosyltransferase-like [KO:K00761] [EC:2.4.2.9]
124647353  uracil phosphoribosyltransferase-like [KO:K00761] [EC:2.4.2.9]
124652959  pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
124699908  7-methylguanosine phosphate-specific 5'-nucleotidase A-like [KO:K24242] [EC:3.1.3.91]
124653952  7-methylguanosine phosphate-specific 5'-nucleotidase A-like [KO:K24242] [EC:3.1.3.91]
124666926  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
124663801  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
124681805  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
124669991  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
124688827  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
124688835  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
124678627  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
124673029  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
124675296  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
124678036  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
124678138  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
124678259  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
124687192  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
124687704  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
124691843  5'-deoxynucleotidase HDDC2-like [KO:K07023] [EC:3.1.3.89]
124665503  5'-deoxynucleotidase HDDC2-like [KO:K07023] [EC:3.1.3.89]
124674340  5'-deoxynucleotidase hdd1-like [KO:K07023] [EC:3.1.3.89]
124687987  5'-deoxynucleotidase HDDC2-like [KO:K07023] [EC:3.1.3.89]
124667974  deoxycytidylate deaminase-like [KO:K01493] [EC:3.5.4.12]
124668427  deoxycytidylate deaminase-like [KO:K01493] [EC:3.5.4.12]
124673511  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
124673512  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
124699975  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
124700049  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
124655600  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
124655835  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
124698677  thymidine kinase-like [KO:K00857] [EC:2.7.1.21]
124703436  thymidine kinase-like [KO:K00857] [EC:2.7.1.21]
124651986  bifunctional dihydrofolate reductase-thymidylate synthase-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
124653628  bifunctional dihydrofolate reductase-thymidylate synthase-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
124669467  bifunctional dihydrofolate reductase-thymidylate synthase isoform X1 [KO:K13998] [EC:1.5.1.3 2.1.1.45]
124672258  bifunctional dihydrofolate reductase-thymidylate synthase-like isoform X1 [KO:K13998] [EC:1.5.1.3 2.1.1.45]
124686829  putative bifunctional dihydrofolate reductase-thymidylate synthase [KO:K13998] [EC:1.5.1.3 2.1.1.45]
124686834  putative bifunctional dihydrofolate reductase-thymidylate synthase [KO:K13998] [EC:1.5.1.3 2.1.1.45]
124693084  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic [KO:K00207] [EC:1.3.1.2]
124662920  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
124677047  beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
lrd00030  Pentose phosphate pathway
lrd00220  Arginine biosynthesis
lrd00250  Alanine, aspartate and glutamate metabolism
lrd00280  Valine, leucine and isoleucine degradation
lrd00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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