KEGG   PATHWAY: masz00630
Entry
masz00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudoduganella armeniaca
Class
Metabolism; Carbohydrate metabolism
Pathway map
masz00630  Glyoxylate and dicarboxylate metabolism
masz00630

Module
masz_M00012  Glyoxylate cycle [PATH:masz00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudoduganella armeniaca [GN:masz]
Gene
C9I28_19450  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
C9I28_08450  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
C9I28_14635  malate synthase A [KO:K01638] [EC:2.3.3.9]
C9I28_21425  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
C9I28_21390  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
C9I28_09975  2-methylcitrate synthase [KO:K01659] [EC:2.3.3.5]
C9I28_21440  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
C9I28_15045  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C9I28_01045  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C9I28_25895  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C9I28_24475  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C9I28_02545  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C9I28_02550  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
C9I28_06820  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
C9I28_06825  glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
C9I28_06830  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
C9I28_13810  catalase [KO:K03781] [EC:1.11.1.6]
C9I28_04245  catalase [KO:K03781] [EC:1.11.1.6]
C9I28_21475  catalase [KO:K03781] [EC:1.11.1.6]
C9I28_12885  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
C9I28_03380  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
C9I28_22970  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
C9I28_24950  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
C9I28_11155  alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
C9I28_04225  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
C9I28_10515  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
C9I28_17585  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
C9I28_00745  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C9I28_21320  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C9I28_23520  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C9I28_17590  gcvH; glycine cleavage system protein H [KO:K02437]
C9I28_11060  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
C9I28_03100  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
C9I28_22225  glycerate kinase [KO:K11529] [EC:2.7.1.165]
C9I28_27480  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
C9I28_22480  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
C9I28_18545  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
C9I28_11480  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
C9I28_12215  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
C9I28_18550  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
C9I28_11485  formate dehydrogenase [KO:K00124]
C9I28_12220  formate dehydrogenase [KO:K00124]
C9I28_11495  formate dehydrogenase subunit gamma [KO:K00127]
C9I28_12230  formate dehydrogenase subunit gamma [KO:K00127]
C9I28_11200  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
C9I28_04920  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
masz00010  Glycolysis / Gluconeogenesis
masz00020  Citrate cycle (TCA cycle)
masz00030  Pentose phosphate pathway
masz00053  Ascorbate and aldarate metabolism
masz00071  Fatty acid degradation
masz00230  Purine metabolism
masz00250  Alanine, aspartate and glutamate metabolism
masz00260  Glycine, serine and threonine metabolism
masz00620  Pyruvate metabolism
masz00710  Carbon fixation by Calvin cycle
masz00750  Vitamin B6 metabolism
masz00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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