KEGG   PATHWAY: mavu00630
Entry
mavu00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Mycobacterium avium subsp. paratuberculosis E93
Class
Metabolism; Carbohydrate metabolism
Pathway map
mavu00630  Glyoxylate and dicarboxylate metabolism
mavu00630

Module
mavu_M00012  Glyoxylate cycle [PATH:mavu00630]
mavu_M00621  Glycine cleavage system [PATH:mavu00630]
mavu_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mavu00630]
Other DBs
GO: 0046487 0043648
Organism
Mycobacterium avium subsp. paratuberculosis E93 [GN:mavu]
Gene
RE97_10935  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
RE97_20305  Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
RE97_17220  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
RE97_11400  malate synthase [KO:K01638] [EC:2.3.3.9]
RE97_06330  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
RE97_17805  citrate synthase [KO:K01647] [EC:2.3.3.1]
RE97_15055  hypothetical protein [KO:K01647] [EC:2.3.3.1]
RE97_15065  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
RE97_13180  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
RE97_06875  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_07020  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_00375  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_11260  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_10565  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_15250  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_16525  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_16630  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_16685  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_14730  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_07135  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
RE97_06870  glyoxalase [KO:K05606] [EC:5.1.99.1]
RE97_01810  acetyl-COA carboxylase [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
RE97_01835  methylmalonyl-CoA carboxyltransferase [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
RE97_01830  hypothetical protein [KO:K27095]
RE97_09125  propionyl-CoA carboxylase subunit beta [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
RE97_13060  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
RE97_13065  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
RE97_15840  methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
RE97_15845  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
RE97_06455  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
RE97_00425  catalase [KO:K03781] [EC:1.11.1.6]
RE97_00430  catalase [KO:K03781] [EC:1.11.1.6]
RE97_10505  catalase [KO:K03781] [EC:1.11.1.6]
RE97_02685  katE; hydroperoxidase [KO:K03781] [EC:1.11.1.6]
RE97_05310  catalase [KO:K03781] [EC:1.11.1.6]
RE97_09210  hypothetical protein [KO:K01091] [EC:3.1.3.18]
RE97_11150  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
RE97_04295  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
RE97_09300  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
RE97_09320  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
RE97_05545  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
RE97_11420  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
RE97_09380  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
RE97_20280  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RE97_11445  glycine cleavage system protein H [KO:K02437]
RE97_09410  hypothetical protein [KO:K00865] [EC:2.7.1.165]
RE97_06355  kgd; alpha-ketoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
RE97_00440  formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
RE97_17420  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
RE97_17425  dehydrogenase [KO:K00123] [EC:1.17.1.9]
RE97_17415  ferredoxin [KO:K00124]
RE97_01205  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mavu00010  Glycolysis / Gluconeogenesis
mavu00020  Citrate cycle (TCA cycle)
mavu00030  Pentose phosphate pathway
mavu00053  Ascorbate and aldarate metabolism
mavu00071  Fatty acid degradation
mavu00230  Purine metabolism
mavu00250  Alanine, aspartate and glutamate metabolism
mavu00260  Glycine, serine and threonine metabolism
mavu00620  Pyruvate metabolism
mavu00710  Carbon fixation by Calvin cycle
mavu00750  Vitamin B6 metabolism
mavu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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