KEGG   PATHWAY: metx00630
Entry
metx00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Methylobacterium sp. XJLW
Class
Metabolism; Carbohydrate metabolism
Pathway map
metx00630  Glyoxylate and dicarboxylate metabolism
metx00630

Module
metx_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:metx00630]
Other DBs
GO: 0046487 0043648
Organism
Methylobacterium sp. XJLW [GN:metx]
Gene
A3862_02700  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
A3862_12535  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
A3862_22290  malate synthase G [KO:K01638] [EC:2.3.3.9]
A3862_25980  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
A3862_20810  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
A3862_13555  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
A3862_28770  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
A3862_13160  succinate--CoA ligase subunit alpha [KO:K08692] [EC:6.2.1.9]
A3862_13155  succinate--CoA ligase subunit beta [KO:K14067] [EC:6.2.1.9]
A3862_05550  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A3862_25280  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A3862_09135  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A3862_27095  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A3862_02225  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A3862_05545  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
A3862_05920  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
A3862_25070  crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
A3862_20740  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
A3862_25065  protein meaA [KO:K14447] [EC:5.4.99.63]
A3862_09600  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
A3862_09080  hypothetical protein [KO:K14449] [EC:4.2.1.148]
A3862_13170  malyl-CoA lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
A3862_22625  aldolase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
A3862_18010  acetyl/propionyl-CoA carboxylase subuit alpha [KO:K01965] [EC:6.4.1.3]
A3862_17610  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
A3862_16275  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
A3862_22185  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
A3862_09750  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
A3862_08135  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
A3862_08140  2-hydroxy-acid oxidase [KO:K11473] [EC:1.1.99.14]
A3862_21490  catalase [KO:K03781] [EC:1.11.1.6]
A3862_27765  catalase [KO:K03781] [EC:1.11.1.6]
A3862_18310  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
A3862_03185  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
A3862_13140  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
A3862_11570  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
A3862_26290  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
A3862_09150  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
A3862_18250  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
A3862_13135  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
A3862_05500  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A3862_05505  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
A3862_11655  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
A3862_04335  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
A3862_02640  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A3862_12865  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A3862_25610  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A3862_25945  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A3862_22010  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
A3862_01620  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
A3862_11445  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
A3862_14310  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A3862_01730  oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
A3862_23230  oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
A3862_06120  peptidase [KO:K00126] [EC:1.17.1.9]
A3862_25125  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
A3862_25130  formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
A3862_04305  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
A3862_06125  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
A3862_04300  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
A3862_25135  formate dehydrogenase subunit beta [KO:K00124]
A3862_06130  formate dehydrogenase [KO:K00124]
A3862_25140  formate dehydrogenase subunit gamma [KO:K00127]
A3862_06135  formate dehydrogenase subunit gamma [KO:K00127]
A3862_15185  esterase [KO:K01432] [EC:3.5.1.9]
A3862_03150  formamidase [KO:K01455] [EC:3.5.1.49]
A3862_02765  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
A3862_02780  formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
A3862_17835  formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
metx00010  Glycolysis / Gluconeogenesis
metx00020  Citrate cycle (TCA cycle)
metx00030  Pentose phosphate pathway
metx00053  Ascorbate and aldarate metabolism
metx00071  Fatty acid degradation
metx00230  Purine metabolism
metx00250  Alanine, aspartate and glutamate metabolism
metx00260  Glycine, serine and threonine metabolism
metx00620  Pyruvate metabolism
metx00710  Carbon fixation by Calvin cycle
metx00750  Vitamin B6 metabolism
metx00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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