KEGG   PATHWAY: mmer03020
Entry
mmer03020                   Pathway                                
Name
RNA polymerase - Mercenaria mercenaria (northern quahog)
Class
Genetic Information Processing; Transcription
Pathway map
mmer03020  RNA polymerase
mmer03020

Other DBs
GO: 0000428
Organism
Mercenaria mercenaria (northern quahog) [GN:mmer]
Gene
123546580  DNA-directed RNA polymerase II subunit RPB2 isoform X1 [KO:K03010] [EC:2.7.7.6]
123554921  DNA-directed RNA polymerase II subunit RPB1-like [KO:K03006] [EC:2.7.7.6]
128557687  DNA-directed RNA polymerase II subunit RPB3-like [KO:K03011]
123549086  DNA-directed RNA polymerase II subunit RPB3-like [KO:K03011]
123533939  DNA-directed RNA polymerase II subunit RPB11-a-like [KO:K03008]
123527558  DNA-directed RNA polymerase II subunit RPB4-like [KO:K03012]
123559527  DNA-directed RNA polymerase II subunit RPB7 [KO:K03015]
123529325  DNA-directed RNA polymerase II subunit RPB9-like [KO:K03017]
123566531  DNA-directed RNA polymerase II subunit GRINL1A-like [KO:K21987]
123551797  DNA-directed RNA polymerase III subunit RPC2-like isoform X1 [KO:K03021] [EC:2.7.7.6]
123564296  DNA-directed RNA polymerase III subunit RPC1-like isoform X1 [KO:K03018] [EC:2.7.7.6]
123557525  DNA-directed RNA polymerases I and III subunit RPAC2-like [KO:K03020]
123542905  DNA-directed RNA polymerases I and III subunit RPAC1-like [KO:K03027]
123565427  DNA-directed RNA polymerase III subunit RPC3-like [KO:K03023]
123563161  DNA-directed RNA polymerase III subunit RPC4-like [KO:K03026]
123564978  DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [KO:K14721]
123533107  DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [KO:K03025]
123566272  DNA-directed RNA polymerase III subunit RPC7-like [KO:K03024]
123563159  DNA-directed RNA polymerase III subunit RPC8-like [KO:K03022]
123523468  DNA-directed RNA polymerase III subunit RPC9-like [KO:K25304]
128552772  DNA-directed RNA polymerase III subunit RPC9-like [KO:K25304]
123530999  DNA-directed RNA polymerase I subunit RPA2-like [KO:K03002] [EC:2.7.7.6]
123551623  DNA-directed RNA polymerase I subunit RPA1-like [KO:K02999] [EC:2.7.7.6]
123544161  DNA-directed RNA polymerase I subunit RPA12-like [KO:K03000]
123557464  DNA-directed RNA polymerase I subunit RPA49-like [KO:K03005]
123524342  DNA-directed RNA polymerases I, II, and III subunit RPABC1 [KO:K03013]
123551828  DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [KO:K03014]
123559369  DNA-directed RNA polymerases I, II, and III subunit RPABC3-like [KO:K03016]
Reference
PMID:10499798
  Authors
Zhang G, Campbell EA, Minakhin L, Richter C, Severinov K, Darst SA.
  Title
Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.
  Journal
Cell 98:811-824 (1999)
DOI:10.1016/S0092-8674(00)81515-9
Reference
PMID:10784442
  Authors
Cramer P, Bushnell DA, Fu J, Gnatt AL, Maier-Davis B, Thompson NE, Burgess RR, Edwards AM, David PR, Kornberg RD.
  Title
Architecture of RNA polymerase II and implications for the transcription mechanism.
  Journal
Science 288:640-649 (2000)
DOI:10.1126/science.288.5466.640
Reference
PMID:19880312
  Authors
Hirata A, Murakami KS
  Title
Archaeal RNA polymerase.
  Journal
Curr Opin Struct Biol 19:724-31 (2009)
DOI:10.1016/j.sbi.2009.10.006
Reference
PMID:18573085
  Authors
Cramer P, Armache KJ, Baumli S, Benkert S, Brueckner F, Buchen C, Damsma GE, Dengl S, Geiger SR, Jasiak AJ, Jawhari A, Jennebach S, Kamenski T, Kettenberger H, Kuhn CD, Lehmann E, Leike K, Sydow JF, Vannini A
  Title
Structure of eukaryotic RNA polymerases.
  Journal
Annu Rev Biophys 37:337-52 (2008)
DOI:10.1146/annurev.biophys.37.032807.130008
Reference
PMID:31835031
  Authors
Hillen HS, Bartuli J, Grimm C, Dienemann C, Bedenk K, Szalay AA, Fischer U, Cramer P
  Title
Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes.
  Journal
Cell 179:1525-1536.e12 (2019)
DOI:10.1016/j.cell.2019.11.023
KO pathway
ko03020   
LinkDB

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