KEGG   PATHWAY: mtr00010
Entry
mtr00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Medicago truncatula (barrel medic)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
mtr00010  Glycolysis / Gluconeogenesis
mtr00010

Module
mtr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mtr00010]
mtr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mtr00010]
mtr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mtr00010]
mtr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mtr00010]
Other DBs
GO: 0006096 0006094
Organism
Medicago truncatula (barrel medic) [GN:mtr]
Gene
11421234  hexokinase-1 [KO:K00844] [EC:2.7.1.1]
11408101  hexokinase-1 [KO:K00844] [EC:2.7.1.1]
25496982  hexokinase-1 [KO:K00844] [EC:2.7.1.1]
11426910  hexokinase-3 [KO:K00844] [EC:2.7.1.1]
11421510  hexokinase-2, chloroplastic [KO:K00844] [EC:2.7.1.1]
11426025  glucose-6-phosphate isomerase 1, chloroplastic [KO:K01810] [EC:5.3.1.9]
11434432  glucose-6-phosphate isomerase, cytosolic 1 [KO:K01810] [EC:5.3.1.9]
11423706  ATP-dependent 6-phosphofructokinase 5, chloroplastic [KO:K00850] [EC:2.7.1.11]
11430664  ATP-dependent 6-phosphofructokinase 7 [KO:K00850] [EC:2.7.1.11]
11415742  ATP-dependent 6-phosphofructokinase 3 [KO:K00850] [EC:2.7.1.11]
11405809  ATP-dependent 6-phosphofructokinase 5, chloroplastic [KO:K00850] [EC:2.7.1.11]
25494344  LOW QUALITY PROTEIN: ATP-dependent 6-phosphofructokinase 2 [KO:K00850] [EC:2.7.1.11]
25490151  ATP-dependent 6-phosphofructokinase 6 [KO:K00850] [EC:2.7.1.11]
11438579  ATP-dependent 6-phosphofructokinase 3 [KO:K00850] [EC:2.7.1.11]
11410489  ATP-dependent 6-phosphofructokinase 4, chloroplastic isoform X1 [KO:K00850] [EC:2.7.1.11]
11445901  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [KO:K00895] [EC:2.7.1.90]
11434359  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [KO:K00895] [EC:2.7.1.90]
11439570  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [KO:K00895] [EC:2.7.1.90]
11430747  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
25498664  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
11416430  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
25496103  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
120576861  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
11445395  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
25494828  fructose-bisphosphate aldolase, cytoplasmic isozyme [KO:K01623] [EC:4.1.2.13]
11440200  LOW QUALITY PROTEIN: fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
25492390  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
11433706  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
25483885  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
25485453  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
25499344  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
25487887  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
11425454  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [KO:K00134] [EC:1.2.1.12]
11441068  glyceraldehyde-3-phosphate dehydrogenase, cytosolic isoform X2 [KO:K00134] [EC:1.2.1.12]
25495698  glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic [KO:K00134] [EC:1.2.1.12]
11407960  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
11421966  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
11424739  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
11441786  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
25495634  phosphoglycerate kinase isoform X1 [KO:K00927] [EC:2.7.2.3]
11442350  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 isoform X2 [KO:K01834] [EC:5.4.2.11]
25489422  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 [KO:K01834] [EC:5.4.2.11]
11417969  phosphoglycerate mutase-like protein 4 [KO:K15634] [EC:5.4.2.11]
11406747  phosphoglycerate mutase-like protein 4 isoform X1 [KO:K15634] [EC:5.4.2.11]
11435852  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
11446699  enolase [KO:K01689] [EC:4.2.1.11]
25499389  enolase [KO:K01689] [EC:4.2.1.11]
11442340  cytosolic enolase 3 [KO:K01689] [EC:4.2.1.11]
25486813  enolase 1, chloroplastic [KO:K01689] [EC:4.2.1.11]
25499373  pyruvate kinase 1, cytosolic isoform X2 [KO:K00873] [EC:2.7.1.40]
25495079  pyruvate kinase, cytosolic isozyme [KO:K00873] [EC:2.7.1.40]
25496020  plastidial pyruvate kinase 2 [KO:K00873] [EC:2.7.1.40]
11440906  pyruvate kinase, cytosolic isozyme-like [KO:K00873] [EC:2.7.1.40]
11446186  pyruvate kinase, cytosolic isozyme [KO:K00873] [EC:2.7.1.40]
11435634  pyruvate kinase isozyme G, chloroplastic isoform X1 [KO:K00873] [EC:2.7.1.40]
11429725  pyruvate kinase 1, cytosolic [KO:K00873] [EC:2.7.1.40]
11419730  plastidial pyruvate kinase 2 [KO:K00873] [EC:2.7.1.40]
11431881  pyruvate kinase, cytosolic isozyme [KO:K00873] [EC:2.7.1.40]
25484474  pyruvate kinase isozyme A, chloroplastic [KO:K00873] [EC:2.7.1.40]
25484886  pyruvate kinase 1, cytosolic [KO:K00873] [EC:2.7.1.40]
25485305  pyruvate kinase isozyme A, chloroplastic [KO:K00873] [EC:2.7.1.40]
120580162  pyruvate, phosphate dikinase 2-like [KO:K01006] [EC:2.7.9.1]
11417770  pyruvate, phosphate dikinase, chloroplastic [KO:K01006] [EC:2.7.9.1]
11416624  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
25500614  pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic [KO:K00161] [EC:1.2.4.1]
11414398  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
11411402  pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic [KO:K00162] [EC:1.2.4.1]
120577439  pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like [KO:K00162] [EC:1.2.4.1]
11442185  pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
11423972  dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
25484885  dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
25484957  dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic [KO:K00627] [EC:2.3.1.12]
25485515  dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [KO:K00627] [EC:2.3.1.12]
11408806  dihydrolipoyl dehydrogenase 2, chloroplastic isoform X1 [KO:K00382] [EC:1.8.1.4]
11422305  dihydrolipoyl dehydrogenase 1, chloroplastic [KO:K00382] [EC:1.8.1.4]
25494137  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
11406365  L-lactate dehydrogenase A [KO:K00016] [EC:1.1.1.27]
11427630  L-lactate dehydrogenase B [KO:K00016] [EC:1.1.1.27]
11420638  pyruvate decarboxylase 1 [KO:K01568] [EC:4.1.1.1]
11439310  pyruvate decarboxylase 1 [KO:K01568] [EC:4.1.1.1]
11426427  pyruvate decarboxylase 2 [KO:K01568] [EC:4.1.1.1]
11413068  pyruvate decarboxylase 2 [KO:K01568] [EC:4.1.1.1]
11436410  pyruvate decarboxylase 2 [KO:K01568] [EC:4.1.1.1]
11415692  pyruvate decarboxylase 2 [KO:K01568] [EC:4.1.1.1]
25479300  8-hydroxygeraniol oxidoreductase isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
11435949  alcohol dehydrogenase-like 7 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
11435950  alcohol dehydrogenase-like 7 isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
11431241  alcohol dehydrogenase-like 2 isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
11432074  8-hydroxygeraniol oxidoreductase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
11435196  alcohol dehydrogenase-like 7 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
25484194  alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
11425223  alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
11422713  alcohol dehydrogenase 1 isoform X2 [KO:K18857] [EC:1.1.1.1]
11411514  alcohol dehydrogenase 1 [KO:K18857] [EC:1.1.1.1]
25489766  alcohol dehydrogenase 1 [KO:K18857] [EC:1.1.1.1]
11422221  alcohol dehydrogenase-like 6 [KO:K00001] [EC:1.1.1.1]
11408667  alcohol dehydrogenase-like 4 [KO:K00001] [EC:1.1.1.1]
25501526  NADPH-dependent aldo-keto reductase, chloroplastic [KO:K00002] [EC:1.1.1.2]
25501528  NADPH-dependent aldo-keto reductase, chloroplastic [KO:K00002] [EC:1.1.1.2]
25498586  NADPH-dependent aldo-keto reductase, chloroplastic isoform X1 [KO:K00002] [EC:1.1.1.2]
11411585  NADPH-dependent aldo-keto reductase, chloroplastic [KO:K00002] [EC:1.1.1.2]
11419261  aldo-keto reductase family 4 member C10 [KO:K00002] [EC:1.1.1.2]
11428103  aldo-keto reductase family 4 member C10 [KO:K00002] [EC:1.1.1.2]
11407540  aldose reductase [KO:K00002] [EC:1.1.1.2]
25501312  benzaldehyde dehydrogenase, mitochondrial [KO:K00128] [EC:1.2.1.3]
11413753  aldehyde dehydrogenase family 3 member F1 isoform X1 [KO:K00128] [EC:1.2.1.3]
11433409  aldehyde dehydrogenase family 3 member F1 [KO:K00128] [EC:1.2.1.3]
11441005  aldehyde dehydrogenase family 3 member H1 [KO:K00128] [EC:1.2.1.3]
11411505  aldehyde dehydrogenase family 3 member H1 [KO:K00128] [EC:1.2.1.3]
11443205  aldehyde dehydrogenase family 2 member B4, mitochondrial [KO:K00128] [EC:1.2.1.3]
25492569  aldehyde dehydrogenase family 3 member F1 [KO:K00128] [EC:1.2.1.3]
25489543  aldehyde dehydrogenase family 2 member B4, mitochondrial isoform X1 [KO:K00128] [EC:1.2.1.3]
25482459  aldehyde dehydrogenase family 3 member H1 isoform X1 [KO:K00128] [EC:1.2.1.3]
11437741  aldehyde dehydrogenase family 7 member A1 [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
11437257  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal [KO:K01895] [EC:6.2.1.1]
11422889  acetate/butyrate--CoA ligase AAE7, peroxisomal [KO:K01913] [EC:6.2.1.1 6.2.1.2]
25486581  acetate/butyrate--CoA ligase AAE7, peroxisomal [KO:K01913] [EC:6.2.1.1 6.2.1.2]
25495288  galactose mutarotase isoform X1 [KO:K01785] [EC:5.1.3.3]
25495289  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
11440207  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
11413122  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
11427981  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
11413693  phosphoglucomutase, cytoplasmic [KO:K01835] [EC:5.4.2.2]
11414670  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
11431767  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
11439651  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
11419460  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
25495118  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
11426124  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
11438410  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
11406522  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
11415895  multiple inositol polyphosphate phosphatase 1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
11436321  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
11423304  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
25501396  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
11433679  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
25495006  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
mtr00020  Citrate cycle (TCA cycle)
mtr00030  Pentose phosphate pathway
mtr00500  Starch and sucrose metabolism
mtr00620  Pyruvate metabolism
mtr00640  Propanoate metabolism
mtr00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system