KEGG   PATHWAY: ncol00010
Entry
ncol00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Nymphaea colorata (blue-petal water lily)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ncol00010  Glycolysis / Gluconeogenesis
ncol00010

Module
ncol_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ncol00010]
ncol_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ncol00010]
ncol_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ncol00010]
ncol_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ncol00010]
Other DBs
GO: 0006096 0006094
Organism
Nymphaea colorata (blue-petal water lily) [GN:ncol]
Gene
116264647  hexokinase-3-like isoform X1 [KO:K00844] [EC:2.7.1.1]
116256027  hexokinase-1-like [KO:K00844] [EC:2.7.1.1]
116258469  hexokinase-1-like [KO:K00844] [EC:2.7.1.1]
116248936  hexokinase-3-like [KO:K00844] [EC:2.7.1.1]
116260477  hexokinase-2, chloroplastic [KO:K00844] [EC:2.7.1.1]
116262580  glucose-6-phosphate isomerase 1, chloroplastic [KO:K01810] [EC:5.3.1.9]
116264147  glucose-6-phosphate isomerase, cytosolic [KO:K01810] [EC:5.3.1.9]
116250120  ATP-dependent 6-phosphofructokinase 2 [KO:K00850] [EC:2.7.1.11]
116263287  ATP-dependent 6-phosphofructokinase 5, chloroplastic [KO:K00850] [EC:2.7.1.11]
116254580  ATP-dependent 6-phosphofructokinase 3-like [KO:K00850] [EC:2.7.1.11]
116265760  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
116256132  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
116256205  ATP-dependent 6-phosphofructokinase 3-like [KO:K00850] [EC:2.7.1.11]
116257628  ATP-dependent 6-phosphofructokinase 3-like [KO:K00850] [EC:2.7.1.11]
116257629  ATP-dependent 6-phosphofructokinase 3-like [KO:K00850] [EC:2.7.1.11]
116257630  uncharacterized protein LOC116257630 [KO:K00850] [EC:2.7.1.11]
116245800  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [KO:K00895] [EC:2.7.1.90]
116257617  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [KO:K00895] [EC:2.7.1.90]
116250690  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
116255130  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
116266960  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
116261348  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
116251408  fructose-bisphosphate aldolase, cytoplasmic isozyme 1-like [KO:K01623] [EC:4.1.2.13]
116264207  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
116264378  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
116248331  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
116248592  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
116259263  fructose-bisphosphate aldolase 1, cytoplasmic [KO:K01623] [EC:4.1.2.13]
116259725  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
116255379  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
116248995  triosephosphate isomerase, chloroplastic-like [KO:K01803] [EC:5.3.1.1]
116260489  triosephosphate isomerase, chloroplastic-like [KO:K01803] [EC:5.3.1.1]
116250500  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
116253732  uncharacterized protein LOC116253732 [KO:K00134] [EC:1.2.1.12]
116266280  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like [KO:K00134] [EC:1.2.1.12]
116248411  glyceraldehyde-3-phosphate dehydrogenase, cytosolic isoform X1 [KO:K00134] [EC:1.2.1.12]
116264415  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
116264687  phosphoglycerate kinase, chloroplastic [KO:K00927] [EC:2.7.2.3]
116265252  LOW QUALITY PROTEIN: uncharacterized protein LOC116265252 [KO:K00927] [EC:2.7.2.3]
116265740  uncharacterized protein LOC116265740 isoform X1 [KO:K00927] [EC:2.7.2.3]
116267542  phosphoglycerate kinase, cytosolic-like isoform X1 [KO:K00927] [EC:2.7.2.3]
116258418  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1-like [KO:K01834] [EC:5.4.2.11]
116258613  phosphoglycerate mutase-like protein 4 [KO:K15634] [EC:5.4.2.11]
116254341  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
116264766  enolase [KO:K01689] [EC:4.2.1.11]
116256672  cytosolic enolase 3 [KO:K01689] [EC:4.2.1.11]
116258325  enolase 1, chloroplastic [KO:K01689] [EC:4.2.1.11]
116260745  pyruvate kinase, cytosolic isozyme-like [KO:K00873] [EC:2.7.1.40]
116250916  pyruvate kinase isozyme A, chloroplastic-like [KO:K00873] [EC:2.7.1.40]
116263740  pyruvate kinase 2, cytosolic-like isoform X1 [KO:K00873] [EC:2.7.1.40]
116264666  pyruvate kinase 1, cytosolic [KO:K00873] [EC:2.7.1.40]
116265523  pyruvate kinase isozyme G, chloroplastic-like [KO:K00873] [EC:2.7.1.40]
116266354  pyruvate kinase 1, cytosolic-like [KO:K00873] [EC:2.7.1.40]
116267207  pyruvate kinase isozyme G, chloroplastic-like [KO:K00873] [EC:2.7.1.40]
116257801  pyruvate kinase isozyme A, chloroplastic-like [KO:K00873] [EC:2.7.1.40]
116247777  LOW QUALITY PROTEIN: pyruvate kinase isozyme A, chloroplastic-like [KO:K00873] [EC:2.7.1.40]
116259804  pyruvate kinase, cytosolic isozyme [KO:K00873] [EC:2.7.1.40]
116264066  pyruvate, phosphate dikinase 2 isoform X1 [KO:K01006] [EC:2.7.9.1]
116251159  pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial-like [KO:K00161] [EC:1.2.4.1]
116259848  pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like [KO:K00161] [EC:1.2.4.1]
116259892  pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like [KO:K00161] [EC:1.2.4.1]
116244947  LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-like [KO:K00162] [EC:1.2.4.1]
116244948  LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-like [KO:K00162] [EC:1.2.4.1]
116244949  LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-like [KO:K00162] [EC:1.2.4.1]
116267550  pyruvate dehydrogenase E1 component subunit beta-like [KO:K00162] [EC:1.2.4.1]
116257549  pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-like [KO:K00162] [EC:1.2.4.1]
116248451  pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial [KO:K00162] [EC:1.2.4.1]
116261091  dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial-like [KO:K00627] [EC:2.3.1.12]
116263631  dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
116259488  dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [KO:K00627] [EC:2.3.1.12]
116249048  dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic [KO:K00627] [EC:2.3.1.12]
116262105  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
116254757  dihydrolipoyl dehydrogenase 1, chloroplastic isoform X1 [KO:K00382] [EC:1.8.1.4]
116260890  pyruvate decarboxylase 1-like [KO:K01568] [EC:4.1.1.1]
116261786  pyruvate decarboxylase 1-like [KO:K01568] [EC:4.1.1.1]
116262786  pyruvate decarboxylase 2-like [KO:K01568] [EC:4.1.1.1]
116255153  pyruvate decarboxylase 2 [KO:K01568] [EC:4.1.1.1]
116252299  alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
116258642  alcohol dehydrogenase-like 2 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
116258847  alcohol dehydrogenase-like 2 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
116261547  alcohol dehydrogenase 3 [KO:K18857] [EC:1.1.1.1]
116261553  alcohol dehydrogenase 3-like [KO:K18857] [EC:1.1.1.1]
116266018  alcohol dehydrogenase 1-like [KO:K18857] [EC:1.1.1.1]
116266659  alcohol dehydrogenase 1 [KO:K18857] [EC:1.1.1.1]
116266856  alcohol dehydrogenase 1-like isoform X1 [KO:K18857] [EC:1.1.1.1]
116266857  alcohol dehydrogenase 1-like [KO:K18857] [EC:1.1.1.1]
116247821  alcohol dehydrogenase 2-like [KO:K18857] [EC:1.1.1.1]
116247825  alcohol dehydrogenase 1-like isoform X1 [KO:K18857] [EC:1.1.1.1]
116248570  alcohol dehydrogenase 2-like [KO:K18857] [EC:1.1.1.1]
116248578  alcohol dehydrogenase 2-like [KO:K18857] [EC:1.1.1.1]
116260546  alcohol dehydrogenase-like 6 isoform X1 [KO:K00001] [EC:1.1.1.1]
116262868  alcohol dehydrogenase-like 4 [KO:K00001] [EC:1.1.1.1]
116259959  alcohol dehydrogenase-like 4 [KO:K00001] [EC:1.1.1.1]
116262933  LOW QUALITY PROTEIN: aldose reductase [KO:K00002] [EC:1.1.1.2]
116254323  NADPH-dependent aldo-keto reductase, chloroplastic-like [KO:K00002] [EC:1.1.1.2]
116255002  NADPH-dependent aldo-keto reductase, chloroplastic-like [KO:K00002] [EC:1.1.1.2]
116250570  benzaldehyde dehydrogenase, mitochondrial-like [KO:K00128] [EC:1.2.1.3]
116245278  LOW QUALITY PROTEIN: uncharacterized protein LOC116245278 [KO:K00128] [EC:1.2.1.3]
116266918  aldehyde dehydrogenase family 3 member H1-like isoform X1 [KO:K00128] [EC:1.2.1.3]
116268098  uncharacterized protein LOC116268098 [KO:K00128] [EC:1.2.1.3]
116259855  aldehyde dehydrogenase family 3 member H1-like [KO:K00128] [EC:1.2.1.3]
116258957  aldehyde dehydrogenase family 7 member B4 [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
116257751  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
116247276  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
116262904  acetate--CoA ligase CCL3 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
116261788  uncharacterized protein LOC116261788 [KO:K01785] [EC:5.1.3.3]
116256686  uncharacterized protein LOC116256686 [KO:K01785] [EC:5.1.3.3]
116258396  phosphoglucomutase, cytoplasmic 1 [KO:K01835] [EC:5.4.2.2]
116247917  phosphoglucomutase, chloroplastic isoform X2 [KO:K01835] [EC:5.4.2.2]
116252374  putative glucose-6-phosphate 1-epimerase isoform X1 [KO:K01792] [EC:5.1.3.15]
116267072  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
116267190  putative glucose-6-phosphate 1-epimerase isoform X1 [KO:K01792] [EC:5.1.3.15]
116247238  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
116247322  putative glucose-6-phosphate 1-epimerase isoform X1 [KO:K01792] [EC:5.1.3.15]
116263272  uncharacterized protein LOC116263272 isoform X1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
116253468  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
116252445  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ncol00020  Citrate cycle (TCA cycle)
ncol00030  Pentose phosphate pathway
ncol00500  Starch and sucrose metabolism
ncol00620  Pyruvate metabolism
ncol00640  Propanoate metabolism
ncol00710  Carbon fixation in photosynthetic organisms
KO pathway
ko00010   
LinkDB

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