KEGG   PATHWAY: ncol00240
Entry
ncol00240                   Pathway                                
Name
Pyrimidine metabolism - Nymphaea colorata (blue-petal water lily)
Class
Metabolism; Nucleotide metabolism
Pathway map
ncol00240  Pyrimidine metabolism
ncol00240

Module
ncol_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ncol00240]
ncol_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ncol00240]
ncol_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ncol00240]
ncol_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ncol00240]
Other DBs
GO: 0006220 0006213
Organism
Nymphaea colorata (blue-petal water lily) [GN:ncol]
Gene
116254216  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
116253733  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
116257333  aspartate carbamoyltransferase, chloroplastic isoform X1 [KO:K00609] [EC:2.1.3.2]
116258852  dihydroorotase, mitochondrial isoform X1 [KO:K01465] [EC:3.5.2.3]
116261365  dihydroorotate dehydrogenase (quinone), mitochondrial-like [KO:K00254] [EC:1.3.5.2]
116248001  dihydroorotate dehydrogenase (quinone), mitochondrial-like isoform X1 [KO:K00254] [EC:1.3.5.2]
116255536  uridine 5'-monophosphate synthase-like isoform X1 [KO:K13421] [EC:2.4.2.10 4.1.1.23]
116248944  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
116252146  UMP-CMP kinase-like isoform X1 [KO:K13800] [EC:2.7.4.14]
116252429  UMP-CMP kinase 3-like isoform X1 [KO:K13800] [EC:2.7.4.14]
116264875  UMP-CMP kinase 3 isoform X1 [KO:K13800] [EC:2.7.4.14]
116244846  LOW QUALITY PROTEIN: uncharacterized protein LOC116244846 [KO:K13800] [EC:2.7.4.14]
116245597  uncharacterized protein LOC116245597 [KO:K13800] [EC:2.7.4.14]
116266568  uridylate kinase PUMPKIN, chloroplastic [KO:K09903] [EC:2.7.4.22]
116252126  nucleoside diphosphate kinase 1-like [KO:K00940] [EC:2.7.4.6]
116264361  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
116265386  nucleoside diphosphate kinase B [KO:K00940] [EC:2.7.4.6]
116267285  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
116267286  nucleoside diphosphate kinase IV, chloroplastic/mitochondrial-like isoform X1 [KO:K00940] [EC:2.7.4.6]
116267288  nucleoside diphosphate kinase III, chloroplastic/mitochondrial-like isoform X1 [KO:K00940] [EC:2.7.4.6]
116245615  nucleoside diphosphate kinase 1-like [KO:K00940] [EC:2.7.4.6]
116248661  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
116259942  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
116260295  probable apyrase 2 isoform X1 [KO:K14641] [EC:3.6.1.5]
116256814  uncharacterized protein LOC116256814 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
116254620  uncharacterized protein LOC116254620 [KO:K01937] [EC:6.3.4.2]
116259255  uncharacterized protein LOC116259255 isoform X1 [KO:K01937] [EC:6.3.4.2]
116260409  uncharacterized protein LOC116260409 [KO:K01937] [EC:6.3.4.2]
116250251  uridine/cytidine kinase UKL1, chloroplastic [KO:K00876] [EC:2.7.1.48]
116250611  inorganic pyrophosphatase TTM2-like isoform X1 [KO:K00876] [EC:2.7.1.48]
116251014  uridine kinase-like protein 4 [KO:K00876] [EC:2.7.1.48]
116245181  uncharacterized protein LOC116245181 [KO:K00876] [EC:2.7.1.48]
116246890  uridine/cytidine kinase UKL1, chloroplastic-like [KO:K00876] [EC:2.7.1.48]
116258488  inorganic pyrophosphatase TTM1-like isoform X1 [KO:K00876] [EC:2.7.1.48]
116256150  uncharacterized protein LOC116256150 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
116246035  uncharacterized protein LOC116246035 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
116248273  uncharacterized protein LOC116248273 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
116260385  probable uridine nucleosidase 2 isoform X1 [KO:K01240] [EC:3.2.2.3]
116245689  uridine nucleosidase 1 [KO:K01240] [EC:3.2.2.3]
116255468  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
116250035  pseudouridine-5'-phosphate glycosidase isoform X1 [KO:K16329] [EC:4.2.1.70]
116247939  LOW QUALITY PROTEIN: uncharacterized protein LOC116247939 [KO:K24242] [EC:3.1.3.91]
116255444  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
116255621  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
116265082  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
116244989  LOW QUALITY PROTEIN: uncharacterized protein LOC116244989 [KO:K10807] [EC:1.17.4.1]
116266988  ribonucleoside-diphosphate reductase large subunit-like isoform X1 [KO:K10807] [EC:1.17.4.1]
116250976  ribonucleoside-diphosphate reductase small chain B-like [KO:K10808] [EC:1.17.4.1]
116264132  ribonucleoside-diphosphate reductase small chain A [KO:K10808] [EC:1.17.4.1]
116268004  LOW QUALITY PROTEIN: ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
116247188  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
116249852  uncharacterized protein LOC116249852 [KO:K16904] [EC:3.6.1.12]
116266191  uncharacterized protein LOC116266191 [KO:K16904] [EC:3.6.1.12]
116245986  uncharacterized protein LOC116245986 isoform X1 [KO:K07023] [EC:3.1.3.89]
116259947  uncharacterized protein LOC116259947 [KO:K07023] [EC:3.1.3.89]
116245584  deoxycytidylate deaminase-like [KO:K01493] [EC:3.5.4.12]
116248718  uncharacterized protein LOC116248718 [KO:K01493] [EC:3.5.4.12]
116251916  thymidylate kinase [KO:K00943] [EC:2.7.4.9]
116248594  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
116245285  uncharacterized protein LOC116245285 [KO:K00857] [EC:2.7.1.21]
116248449  putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1 [KO:K13998] [EC:1.5.1.3 2.1.1.45]
116262078  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic [KO:K00207] [EC:1.3.1.2]
116257428  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
116253687  beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
ncol00030  Pentose phosphate pathway
ncol00220  Arginine biosynthesis
ncol00250  Alanine, aspartate and glutamate metabolism
ncol00280  Valine, leucine and isoleucine degradation
ncol00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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