KEGG   PATHWAY: nge00630
Entry
nge00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Natronobacterium gregoryi
Class
Metabolism; Carbohydrate metabolism
Pathway map
nge00630  Glyoxylate and dicarboxylate metabolism
nge00630

Module
nge_M00621  Glycine cleavage system [PATH:nge00630]
nge_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:nge00630]
nge_M00968  Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:nge00630]
Other DBs
GO: 0046487 0043648
Organism
Natronobacterium gregoryi [GN:nge]
Gene
Natgr_0530  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Natgr_0528  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Natgr_1583  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Natgr_3012  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Natgr_1710  malate/lactate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Natgr_3706  2-methylcitrate synthase/citrate synthase II [KO:K01647] [EC:2.3.3.1]
Natgr_2365  aconitate hydratase, putative, Aquifex type [KO:K01681] [EC:4.2.1.3]
Natgr_3359  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
Natgr_0823  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Natgr_0426  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Natgr_1255  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Natgr_3067  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Natgr_3496  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Natgr_0541  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
Natgr_0367  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
Natgr_3119  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
Natgr_3385  acyl dehydratase [KO:K14449] [EC:4.2.1.148]
Natgr_0598  acetyl/propionyl-CoA carboxylase, alpha subunit [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
Natgr_0600  acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [KO:K19312] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
Natgr_0599  hypothetical protein [KO:K22568] [EC:6.4.1.2 6.4.1.3]
Natgr_0827  methylmalonyl-CoA mutase family protein [KO:K01849] [EC:5.4.99.2]
Natgr_1584  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
Natgr_3115  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
Natgr_2183  methylaspartate mutase, E subunit [KO:K19268] [EC:5.4.99.1]
Natgr_3387  methylaspartate mutase, E subunit [KO:K19268] [EC:5.4.99.1]
Natgr_2479  methylaspartate mutase, S subunit [KO:K01846] [EC:5.4.99.1]
Natgr_2184  methylaspartate mutase, S subunit [KO:K01846] [EC:5.4.99.1]
Natgr_3388  methylaspartate mutase, S subunit [KO:K01846] [EC:5.4.99.1]
Natgr_2182  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
Natgr_3386  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
Natgr_3389  putative acyl-CoA transferase/carnitine dehydratase [KO:K19280] [EC:2.8.3.26]
Natgr_3384  citrate lyase beta subunit [KO:K19281] [EC:4.1.3.24]
Natgr_3029  putative phosphatase [KO:K01091] [EC:3.1.3.18]
Natgr_3197  putative phosphatase [KO:K01091] [EC:3.1.3.18]
Natgr_2104  haloacid dehalogenase superfamily enzyme, subfamily IA [KO:K01091] [EC:3.1.3.18]
Natgr_2252  sucrose-phosphate phosphatase-like hydrolase, Archaeal [KO:K22223] [EC:3.1.3.18]
Natgr_3802  serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
Natgr_3664  glutamate synthase family protein [KO:K00284] [EC:1.4.7.1]
Natgr_2338  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Natgr_3111  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Natgr_3637  glycine/serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Natgr_2870  glycine cleavage system protein P [KO:K00282] [EC:1.4.4.2]
Natgr_2871  glycine cleavage system protein P [KO:K00283] [EC:1.4.4.2]
Natgr_3023  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Natgr_2446  folate-binding protein YgfZ [KO:K00605] [EC:2.1.2.10]
Natgr_1350  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Natgr_3022  glycine cleavage system H protein [KO:K02437]
Natgr_3160  putative glycerate kinase [KO:K11529] [EC:2.7.1.165]
Natgr_0733  haloacid dehalogenase superfamily enzyme, subfamily IA [KO:K26210] [EC:3.1.3.109]
Natgr_0734  ribulose-5-phosphate 4-epimerase-like epimerase or aldolase [KO:K01636] [EC:4.1.2.-]
Natgr_2482  Entner-Doudoroff aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Natgr_0407  Fe-S-cluster-containing hydrogenase subunit [KO:K00124]
Natgr_0409  cytochrome b subunit of formate dehydrogenase [KO:K00127]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
nge00010  Glycolysis / Gluconeogenesis
nge00020  Citrate cycle (TCA cycle)
nge00030  Pentose phosphate pathway
nge00053  Ascorbate and aldarate metabolism
nge00071  Fatty acid degradation
nge00230  Purine metabolism
nge00250  Alanine, aspartate and glutamate metabolism
nge00260  Glycine, serine and threonine metabolism
nge00620  Pyruvate metabolism
nge00710  Carbon fixation by Calvin cycle
nge00750  Vitamin B6 metabolism
nge00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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