KEGG   PATHWAY: npp00620
Entry
npp00620                    Pathway                                
Name
Pyruvate metabolism - Novosphingobium sp. PP1Y
Class
Metabolism; Carbohydrate metabolism
Pathway map
npp00620  Pyruvate metabolism
npp00620

Module
npp_M00168  CAM (Crassulacean acid metabolism), dark [PATH:npp00620]
npp_M00169  CAM (Crassulacean acid metabolism), light [PATH:npp00620]
npp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:npp00620]
Other DBs
GO: 0006090
Organism
Novosphingobium sp. PP1Y [GN:npp]
Gene
PP1Y_AT25829  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PP1Y_AT22962  pyruvate ferredoxin/flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
PP1Y_AT30563  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
PP1Y_AT30556  2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
PP1Y_AT26309  pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
PP1Y_AT26298  pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
PP1Y_AT13756  pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [KO:K00627] [EC:2.3.1.12]
PP1Y_Mpl5575  pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [KO:K00627] [EC:2.3.1.12]
PP1Y_AT25743  pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [KO:K00627] [EC:2.3.1.12]
PP1Y_AT17260  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PP1Y_AT25757  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PP1Y_Mpl3112  acetaldehyde dehydrogenase [KO:K04073] [EC:1.2.1.10]
PP1Y_AT31583  acetaldehyde dehydrogenase [KO:K04073] [EC:1.2.1.10]
PP1Y_AT15707  acetaldehyde dehydrogenase [KO:K04073] [EC:1.2.1.10]
PP1Y_AT32733  acetaldehyde dehydrogenase (acetylating) [KO:K18366] [EC:1.2.1.10 1.2.1.87]
PP1Y_AT34984  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
PP1Y_AT22926  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
PP1Y_Mpl3283  alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PP1Y_AT9397  S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PP1Y_Mpl9457  dehydrogenase [KO:K00002] [EC:1.1.1.2]
PP1Y_AT5722  pyrrolo-quinoline quinone [KO:K00114] [EC:1.1.2.8]
PP1Y_Mpl10829  gluconate 2-dehydrogenase (acceptor) [KO:K22474] [EC:1.1.5.5]
PP1Y_AT23638  acetate kinase [KO:K00925] [EC:2.7.2.1]
PP1Y_AT35211  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PP1Y_AT19599  acetyl-CoA carboxylase carboxyl transferase subunit alpha [KO:K01962] [EC:6.4.1.2 2.1.3.15]
PP1Y_AT19621  acetyl-CoA carboxylase biotin carboxyl carrier protein [KO:K02160]
PP1Y_AT19609  biotin carboxylase [KO:K01961] [EC:6.4.1.2 6.3.4.14]
PP1Y_AT19630  acetyl-CoA carboxylase carboxyl transferase subunit beta [KO:K01963] [EC:6.4.1.2 2.1.3.15]
PP1Y_Mpl4225  aldehyde dehydrogenase (NAD+) [KO:K00128] [EC:1.2.1.3]
PP1Y_AT11682  aldehyde dehydrogenase (NAD+) [KO:K00128] [EC:1.2.1.3]
PP1Y_Mpl6357  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
PP1Y_AT5672  aldehyde dehydrogenase (NAD+) [KO:K00138] [EC:1.2.1.-]
PP1Y_AT15728  aldehyde dehydrogenase (acceptor) [KO:K00138] [EC:1.2.1.-]
PP1Y_AT31557  aldehyde dehydrogenase (acceptor) [KO:K00138] [EC:1.2.1.-]
PP1Y_Mpl8310  6-carboxyhexanoate-CoA ligase [KO:K24012] [EC:6.2.1.13]
PP1Y_AT13194  CoA-binding protein [KO:K24012] [EC:6.2.1.13]
PP1Y_Mpl6750  acetyl-CoA synthetase (ADP-forming) [KO:K24012] [EC:6.2.1.13]
PP1Y_Mpl10102  L-lactate dehydrogenase (cytochrome) [KO:K00101] [EC:1.1.2.3]
PP1Y_AT13337  pyruvate dehydrogenase (cytochrome) [KO:K00156] [EC:1.2.5.1]
PP1Y_AT24162  D-lactate dehydrogenase [KO:K03778] [EC:1.1.1.28]
PP1Y_Mpl8985  D-lactate dehydrogenase [KO:K03777] [EC:1.1.5.12]
PP1Y_AT32830  D-lactate dehydrogenase [KO:K03777] [EC:1.1.5.12]
PP1Y_Mpl9284  D-lactate dehydrogenase (cytochrome) [KO:K00102] [EC:1.1.2.4]
PP1Y_AT18786  lactoylglutathione lyase [KO:K01759] [EC:4.4.1.5]
PP1Y_AT32855  lactoylglutathione lyase [KO:K01759] [EC:4.4.1.5]
PP1Y_AT13944  hydroxyacylglutathione hydrolase [KO:K01069] [EC:3.1.2.6]
PP1Y_AT27719  beta-lactamase-like [KO:K01069] [EC:3.1.2.6]
PP1Y_Mpl2226  beta-lactamase-like [KO:K01069] [EC:3.1.2.6]
PP1Y_Mpl4039  gyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
PP1Y_AT1011  malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [KO:K00029] [EC:1.1.1.40]
PP1Y_Mpl10035  malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [KO:K00029] [EC:1.1.1.40]
PP1Y_AT17313  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
PP1Y_AT37168  fumarate hydratase, class I [KO:K01676] [EC:4.2.1.2]
PP1Y_AT4446  fumarate hydratase, class II [KO:K01679] [EC:4.2.1.2]
PP1Y_AT6901  phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
PP1Y_AT28221  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
PP1Y_AT31098  pyruvate,orthophosphate dikinase [KO:K01006] [EC:2.7.9.1]
PP1Y_AT25281  pyruvate,orthophosphate dikinase [KO:K01006] [EC:2.7.9.1]
PP1Y_AT16019  pyruvate,orthophosphate dikinase [KO:K01006] [EC:2.7.9.1]
PP1Y_AT23513  pyruvate, water dikinase [KO:K01007] [EC:2.7.9.2]
PP1Y_AT20390  malate synthase [KO:K01638] [EC:2.3.3.9]
PP1Y_AT27433  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
PP1Y_Mpl2944  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
PP1Y_Mpl2994  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
PP1Y_AT31387  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
PP1Y_AT31984  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
PP1Y_AT29734  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
PP1Y_AT12778  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
PP1Y_AT24633  2-isopropylmalate synthase [KO:K01649] [EC:2.3.3.13]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00033  Acetate
C00036  Oxaloacetate
C00042  Succinate
C00058  Formate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00083  Malonyl-CoA
C00084  Acetaldehyde
C00122  Fumarate
C00149  (S)-Malate
C00186  (S)-Lactate
C00227  Acetyl phosphate
C00256  (R)-Lactate
C00332  Acetoacetyl-CoA
C00424  (S)-Lactaldehyde
C00469  Ethanol
C00546  Methylglyoxal
C00937  (R)-Lactaldehyde
C01251  (R)-2-Hydroxybutane-1,2,4-tricarboxylate
C02488  (R)-2-Ethylmalate
C02504  alpha-Isopropylmalate
C03248  Acetylenedicarboxylate
C03451  (R)-S-Lactoylglutathione
C03981  2-Hydroxyethylenedicarboxylate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05993  Acetyl adenylate
C05994  2-Propylmalate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Related
pathway
npp00010  Glycolysis / Gluconeogenesis
npp00020  Citrate cycle (TCA cycle)
npp00061  Fatty acid biosynthesis
npp00250  Alanine, aspartate and glutamate metabolism
npp00260  Glycine, serine and threonine metabolism
npp00290  Valine, leucine and isoleucine biosynthesis
npp00300  Lysine biosynthesis
npp00630  Glyoxylate and dicarboxylate metabolism
npp00640  Propanoate metabolism
npp00650  Butanoate metabolism
npp00760  Nicotinate and nicotinamide metabolism
KO pathway
ko00620   
LinkDB

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