KEGG   PATHWAY: npr03250
Entry
npr03250                    Pathway                                
Name
Viral life cycle - HIV-1 - Nanorana parkeri (Xizang Plateau frog)
Class
Genetic Information Processing; Information processing in viruses
Pathway map
npr03250  Viral life cycle - HIV-1
npr03250

Organism
Nanorana parkeri (Xizang Plateau frog) [GN:npr]
Gene
108791340  CXCR4; C-X-C chemokine receptor type 4 [KO:K04189]
108795996  T-cell surface glycoprotein CD4-like [KO:K06454]
108795627  MAP1A; microtubule-associated protein 1A [KO:K10429]
108802324  MAP1S; microtubule-associated protein 1S [KO:K10429]
108788476  MAP1B; microtubule-associated protein 1B [KO:K10429]
108783883  FEZ1; fasciculation and elongation protein zeta-1 isoform X1 [KO:K25663]
108798616  BICD1; protein bicaudal D homolog 1 [KO:K18739]
108784474  protein bicaudal D homolog 2-like [KO:K18739]
108795817  BICD2; protein bicaudal D homolog 2 [KO:K18739]
108798854  SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [KO:K22544] [EC:3.1.5.-]
108799837  PSIP1; PC4 and SFRS1-interacting protein isoform X1 [KO:K25057]
108802540  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
108794796  SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 [KO:K11648]
108785588  peptidyl-prolyl cis-trans isomerase-like [KO:K03767] [EC:5.2.1.8]
108794183  CPSF7; cleavage and polyadenylation specificity factor subunit 7 isoform X1 [KO:K14398]
108804568  CPSF6; LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 6 [KO:K14398]
108787507  TNPO3; transportin-3 isoform X1 [KO:K15436]
108783969  MX1; interferon-induced GTP-binding protein Mx1 [KO:K14754]
108788127  interferon-induced GTP-binding protein Mx2-like [KO:K14754]
108787800  interferon-induced GTP-binding protein Mx-like [KO:K14754]
108787801  interferon-induced GTP-binding protein Mx-like [KO:K14754]
108798998  interferon-induced GTP-binding protein Mx2-like [KO:K14754]
108796698  E3 SUMO-protein ligase RanBP2-like [KO:K12172] [EC:2.3.2.-]
108789572  NUP153; nuclear pore complex protein Nup153 [KO:K14296]
108793027  EP300; histone acetyltransferase p300 [KO:K04498] [EC:2.3.1.48]
108791110  CREBBP; CREB-binding protein [KO:K04498] [EC:2.3.1.48]
108797631  KAT2B; histone acetyltransferase KAT2B isoform X1 [KO:K06062] [EC:2.3.1.48]
108788931  KAT2A; histone acetyltransferase KAT2A [KO:K06062] [EC:2.3.1.48]
108796874  MDFIC; myoD family inhibitor domain-containing protein [KO:K27688]
108799342  CDK9; cyclin-dependent kinase 9 [KO:K02211] [EC:2.7.11.22 2.7.11.23]
108792303  CCNT2; cyclin-T2 isoform X1 [KO:K15188]
108796188  CCNT1; cyclin-T1 [KO:K15188]
108792441  AFF4; AF4/FMR2 family member 4 [KO:K15185]
108790050  ELL2; RNA polymerase II elongation factor ELL2 [KO:K15183]
108795621  ELL3; RNA polymerase II elongation factor ELL3 [KO:K15183]
108787830  ELL; RNA polymerase II elongation factor ELL isoform X1 [KO:K15183]
108800206  MLLT1; protein ENL [KO:K15187]
108799630  MLLT3; protein AF-9 isoform X1 [KO:K15187]
108788838  NELFA; negative elongation factor A [KO:K15179]
108794384  NELFB; negative elongation factor B [KO:K15180]
108802482  NELFCD; negative elongation factor C/D [KO:K15181]
108786542  NELFE; negative elongation factor E [KO:K15182]
108797851  SUPT4H1; transcription elongation factor SPT4 [KO:K15171]
108804989  SUPT5H; transcription elongation factor SPT5 isoform X1 [KO:K15172]
108786584  XPO1; exportin-1 [KO:K14290]
108795534  RAN; GTP-binding nuclear protein Ran [KO:K07936]
108799145  FURIN; furin [KO:K01349] [EC:3.4.21.75]
108802799  SERINC3; serine incorporator 3 [KO:K25661]
108797580  SERINC5; serine incorporator 5 [KO:K25655]
108784759  HGS; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182]
108786078  TSG101; tumor susceptibility gene 101 protein [KO:K12183]
108795286  CHMP6; charged multivesicular body protein 6 [KO:K12195]
108786121  CHMP4B; charged multivesicular body protein 4b [KO:K12194]
108787448  PDCD6IP; programmed cell death 6-interacting protein [KO:K12200]
108787726  VPS4A; vacuolar protein sorting-associated protein 4A [KO:K12196]
108792579  vacuolar protein sorting-associated protein 4A-like [KO:K12196]
108793660  VPS4B; vacuolar protein sorting-associated protein 4B [KO:K12196]
Reference
PMID:27357278
  Authors
Li G, De Clercq E
  Title
HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  Journal
Microbiol Mol Biol Rev 80:679-731 (2016)
DOI:10.1128/MMBR.00065-15
Reference
PMID:21284899
  Authors
Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  Title
Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  Journal
J Transl Med 9 Suppl 1:S1 (2011)
DOI:10.1186/1479-5876-9-S1-S1
Reference
PMID:31028522
  Authors
Novikova M, Zhang Y, Freed EO, Peng K
  Title
Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  Journal
Virol Sin 34:119-134 (2019)
DOI:10.1007/s12250-019-00095-3
Reference
PMID:30286189
  Authors
Rawle DJ, Harrich D
  Title
Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  Journal
PLoS Pathog 14:e1007270 (2018)
DOI:10.1371/journal.ppat.1007270
Reference
PMID:25036886
  Authors
Le Sage V, Mouland AJ, Valiente-Echeverria F
  Title
Roles of HIV-1 capsid in viral replication and immune evasion.
  Journal
Virus Res 193:116-29 (2014)
DOI:10.1016/j.virusres.2014.07.010
Reference
PMID:32429351
  Authors
Murphy RE, Saad JS
  Title
The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  Journal
Viruses 12:E548 (2020)
DOI:10.3390/v12050548
Reference
PMID:21360054
  Authors
He N, Zhou Q
  Title
New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  Journal
J Neuroimmune Pharmacol 6:260-8 (2011)
DOI:10.1007/s11481-011-9267-6
Reference
PMID:19865606
  Authors
Pincetic A, Leis J
  Title
The Mechanism of Budding of Retroviruses From Cell Membranes.
  Journal
Adv Virol 2009:6239691-6239699 (2009)
DOI:10.1155/2009/623969
Reference
PMID:32858867
  Authors
Kleinpeter AB, Freed EO
  Title
HIV-1 Maturation: Lessons Learned from Inhibitors.
  Journal
Viruses 12:E940 (2020)
DOI:10.3390/v12090940
Reference
PMID:12944466
  Authors
Young TM, Wang Q, Pe'ery T, Mathews MB
  Title
The human I-mfa domain-containing protein, HIC, interacts with cyclin T1 and modulates P-TEFb-dependent transcription.
  Journal
Mol Cell Biol 23:6373-84 (2003)
DOI:10.1128/MCB.23.18.6373-6384.2003
Related
pathway
npr03013  Nucleocytoplasmic transport
npr04144  Endocytosis
KO pathway
ko03250   
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