KEGG   PATHWAY: nsu00030
Entry
nsu00030                    Pathway                                
Name
Pentose phosphate pathway - Neomonachus schauinslandi (Hawaiian monk seal)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
nsu00030  Pentose phosphate pathway
nsu00030

Module
nsu_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:nsu00030]
nsu_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:nsu00030]
nsu_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:nsu00030]
nsu_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:nsu00030]
Other DBs
GO: 0006098
Organism
Neomonachus schauinslandi (Hawaiian monk seal) [GN:nsu]
Gene
110590345  GPI; glucose-6-phosphate isomerase isoform X1 [KO:K01810] [EC:5.3.1.9]
110574205  G6PD; glucose-6-phosphate 1-dehydrogenase isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
110574438  PGLS; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
110575118  H6PD; GDH/6PGL endoplasmic bifunctional protein [KO:K13937] [EC:1.1.1.47 3.1.1.31]
110575123  PGD; 6-phosphogluconate dehydrogenase, decarboxylating isoform X1 [KO:K00033] [EC:1.1.1.44 1.1.1.343]
110592351  RPE; ribulose-phosphate 3-epimerase isoform X1 [KO:K01783] [EC:5.1.3.1]
110571278  ribulose-phosphate 3-epimerase-like isoform X1 [KO:K01783] [EC:5.1.3.1]
110588594  TKTL2; transketolase-like protein 2 isoform X1 [KO:K00615] [EC:2.2.1.1]
110584978  TKT; transketolase [KO:K00615] [EC:2.2.1.1]
110574275  TKTL1; transketolase-like protein 1 isoform X1 [KO:K00615] [EC:2.2.1.1]
110582256  TALDO1; transaldolase [KO:K00616] [EC:2.2.1.2]
110587305  RPIA; ribose-5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
110592888  SHPK; sedoheptulokinase [KO:K11214] [EC:2.7.1.14]
110580860  DERA; deoxyribose-phosphate aldolase isoform X1 [KO:K01619] [EC:4.1.2.4]
123325702  LOW QUALITY PROTEIN: deoxyribose-phosphate aldolase-like [KO:K01619] [EC:4.1.2.4]
110587313  RBKS; ribokinase [KO:K00852] [EC:2.7.1.15]
110571837  PGM1; phosphoglucomutase-1 isoform X2 [KO:K01835] [EC:5.4.2.2]
110590748  PGM2; phosphoglucomutase-2 isoform X2 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
110580045  PRPS1L1; LOW QUALITY PROTEIN: ribose-phosphate pyrophosphokinase 3 [KO:K00948] [EC:2.7.6.1]
110570243  PRPS1; ribose-phosphate pyrophosphokinase 1 isoform X1 [KO:K00948] [EC:2.7.6.1]
110575097  PRPS2; ribose-phosphate pyrophosphokinase 2 [KO:K00948] [EC:2.7.6.1]
110571057  RGN; regucalcin isoform X1 [KO:K01053] [EC:3.1.1.17]
110569956  IDNK; probable gluconokinase [KO:K00851] [EC:2.7.1.12]
110584891  GLYCTK; glycerate kinase [KO:K11529] [EC:2.7.1.165]
110581538  ALDOB; fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
110589931  ALDOA; fructose-bisphosphate aldolase A isoform X2 [KO:K01623] [EC:4.1.2.13]
110592848  ALDOC; fructose-bisphosphate aldolase C isoform X1 [KO:K01623] [EC:4.1.2.13]
110569939  FBP1; fructose-1,6-bisphosphatase 1 isoform X1 [KO:K03841] [EC:3.1.3.11]
110569940  FBP2; fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
110581150  ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
110571112  PFKL; ATP-dependent 6-phosphofructokinase, liver type [KO:K00850] [EC:2.7.1.11]
110593512  PFKM; ATP-dependent 6-phosphofructokinase, muscle type isoform X1 [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
nsu00010  Glycolysis / Gluconeogenesis
nsu00040  Pentose and glucuronate interconversions
nsu00052  Galactose metabolism
nsu00230  Purine metabolism
nsu00240  Pyrimidine metabolism
nsu00340  Histidine metabolism
nsu00630  Glyoxylate and dicarboxylate metabolism
nsu00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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