KEGG   PATHWAY: osn00030
Entry
osn00030                    Pathway                                
Name
Pentose phosphate pathway - Octopus sinensis (East Asian common octopus)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
osn00030  Pentose phosphate pathway
osn00030

Module
osn_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:osn00030]
osn_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:osn00030]
osn_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:osn00030]
osn_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:osn00030]
Other DBs
GO: 0006098
Organism
Octopus sinensis (East Asian common octopus) [GN:osn]
Gene
115216343  glucose-6-phosphate isomerase isoform X1 [KO:K01810] [EC:5.3.1.9]
115220357  glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
115216558  6-phosphogluconolactonase-like [KO:K01057] [EC:3.1.1.31]
115228350  probable 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
115211672  GDH/6PGL endoplasmic bifunctional protein-like [KO:K13937] [EC:1.1.1.47 3.1.1.31]
115212732  6-phosphogluconate dehydrogenase, decarboxylating isoform X1 [KO:K00033] [EC:1.1.1.44 1.1.1.343]
115210409  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
115210747  transketolase [KO:K00615] [EC:2.2.1.1]
115223981  transaldolase [KO:K00616] [EC:2.2.1.2]
115228863  ribose-5-phosphate isomerase-like [KO:K01807] [EC:5.3.1.6]
115219971  ribose-5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
115215548  sedoheptulokinase [KO:K11214] [EC:2.7.1.14]
115209894  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
115217290  ribokinase-like isoform X1 [KO:K00852] [EC:2.7.1.15]
115223968  phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
115223529  phosphoglucomutase-2-like [KO:K15779] [EC:5.4.2.2 5.4.2.7]
115222635  ribose-phosphate pyrophosphokinase 1 isoform X1 [KO:K00948] [EC:2.7.6.1]
115222191  regucalcin [KO:K01053] [EC:3.1.1.17]
115222242  regucalcin-like [KO:K01053] [EC:3.1.1.17]
115222243  regucalcin-like [KO:K01053] [EC:3.1.1.17]
115222262  regucalcin-like isoform X1 [KO:K01053] [EC:3.1.1.17]
118760839  regucalcin-like isoform X2 [KO:K01053] [EC:3.1.1.17]
115222288  regucalcin-like isoform X1 [KO:K01053] [EC:3.1.1.17]
115222386  regucalcin-like [KO:K01053] [EC:3.1.1.17]
115209749  LOW QUALITY PROTEIN: glycerate kinase-like [KO:K11529] [EC:2.7.1.165]
115226244  fructose-bisphosphate aldolase isoform X2 [KO:K01623] [EC:4.1.2.13]
115220925  fructose-1,6-bisphosphatase 1 [KO:K03841] [EC:3.1.3.11]
115209955  ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
osn00010  Glycolysis / Gluconeogenesis
osn00040  Pentose and glucuronate interconversions
osn00052  Galactose metabolism
osn00230  Purine metabolism
osn00240  Pyrimidine metabolism
osn00340  Histidine metabolism
osn00630  Glyoxylate and dicarboxylate metabolism
osn00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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