KEGG   PATHWAY: pee00030
Entry
pee00030                    Pathway                                
Name
Pentose phosphate pathway - Phycodurus eques (leafy seadragon)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pee00030  Pentose phosphate pathway
pee00030

Module
pee_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pee00030]
pee_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pee00030]
pee_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pee00030]
pee_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pee00030]
Other DBs
GO: 0006098
Organism
Phycodurus eques (leafy seadragon) [GN:pee]
Gene
133402529  gpia; glucose-6-phosphate isomerase a isoform X1 [KO:K01810] [EC:5.3.1.9]
133397900  gpib; glucose-6-phosphate isomerase b isoform X1 [KO:K01810] [EC:5.3.1.9]
133409532  g6pd; glucose-6-phosphate 1-dehydrogenase isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
133414917  pgls; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
133409274  h6pd; GDH/6PGL endoplasmic bifunctional protein [KO:K13937] [EC:1.1.1.47 3.1.1.31]
133404918  pgd; 6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
133410697  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
133413182  tktb; transketolase-like protein 2 [KO:K00615] [EC:2.2.1.1]
133409122  tkta; transketolase [KO:K00615] [EC:2.2.1.1]
133399539  transketolase-like [KO:K00615] [EC:2.2.1.1]
133399133  taldo1; transaldolase [KO:K00616] [EC:2.2.1.2]
133412641  rpia; ribose-5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
133416311  shpk; sedoheptulokinase isoform X1 [KO:K11214] [EC:2.7.1.14]
133397139  dera; deoxyribose-phosphate aldolase isoform X1 [KO:K01619] [EC:4.1.2.4]
133412481  rbks; ribokinase [KO:K00852] [EC:2.7.1.15]
133406671  pgm1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
133411615  phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
133403962  pgm2; phosphoglucomutase-2 isoform X1 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
133412410  ribose-phosphate pyrophosphokinase 2 [KO:K00948] [EC:2.7.6.1]
133407662  prps1b; ribose-phosphate pyrophosphokinase 1 isoform X1 [KO:K00948] [EC:2.7.6.1]
133399874  probable gluconokinase isoform X1 [KO:K00851] [EC:2.7.1.12]
133409108  glyctk; glycerate kinase [KO:K11529] [EC:2.7.1.165]
133418002  aldoab; aldolase a, fructose-bisphosphate, b [KO:K01623] [EC:4.1.2.13]
133407317  aldob; fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
133414350  fructose-bisphosphate aldolase A-like [KO:K01623] [EC:4.1.2.13]
133415785  aldocb; fructose-bisphosphate aldolase C-B [KO:K01623] [EC:4.1.2.13]
133404879  aldoca; fructose-bisphosphate aldolase C-A [KO:K01623] [EC:4.1.2.13]
133400087  fbp2; fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
133400088  fructose-1,6-bisphosphatase 1-like [KO:K03841] [EC:3.1.3.11]
133413740  fructose-1,6-bisphosphatase 1-like [KO:K03841] [EC:3.1.3.11]
133408330  pfkmb; phosphofructokinase, muscle b [KO:K00850] [EC:2.7.1.11]
133396234  pfkpa; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
133410358  pfkla; ATP-dependent 6-phosphofructokinase, liver type [KO:K00850] [EC:2.7.1.11]
133411213  pfkpb; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
133411221  pfkma; phosphofructokinase, muscle a [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
pee00010  Glycolysis / Gluconeogenesis
pee00040  Pentose and glucuronate interconversions
pee00052  Galactose metabolism
pee00230  Purine metabolism
pee00240  Pyrimidine metabolism
pee00340  Histidine metabolism
pee00630  Glyoxylate and dicarboxylate metabolism
pee00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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