KEGG   PATHWAY: pgis00010
Entry
pgis00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Paraburkholderia ginsengisoli
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pgis00010  Glycolysis / Gluconeogenesis
pgis00010

Module
pgis_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pgis00010]
pgis_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pgis00010]
pgis_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pgis00010]
Other DBs
GO: 0006096 0006094
Organism
Paraburkholderia ginsengisoli [GN:pgis]
Gene
I6I06_07915  bifunctional transcriptional regulator/glucokinase [KO:K00845] [EC:2.7.1.2]
I6I06_04430  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
I6I06_16190  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
I6I06_22530  class 1 fructose-bisphosphatase [KO:K01086] [EC:3.1.3.11 3.1.3.37]
I6I06_22980  fructose-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
I6I06_15035  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
I6I06_22515  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
I6I06_06800  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
I6I06_14475  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
I6I06_15025  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
I6I06_10045  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
I6I06_14665  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
I6I06_01725  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
I6I06_15030  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
I6I06_02930  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
I6I06_11385  mdeB; alpha-ketoglutarate dehydrogenase [KO:K00163] [EC:1.2.4.1]
I6I06_01565  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
I6I06_01570  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
I6I06_01575  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
I6I06_05605  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
I6I06_15145  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
I6I06_24715  zinc-dependent alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
I6I06_18770  zinc-binding dehydrogenase [KO:K00001] [EC:1.1.1.1]
I6I06_21340  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
I6I06_22690  PQQ-dependent dehydrogenase, methanol/ethanol family [KO:K00114] [EC:1.1.2.8]
I6I06_21605  cytochrome c [KO:K22474] [EC:1.1.5.5]
I6I06_18545  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
I6I06_19210  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
I6I06_07635  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
I6I06_11250  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
I6I06_24130  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
I6I06_24660  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
I6I06_01040  acyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
I6I06_06355  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
I6I06_10770  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
I6I06_14410  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
I6I06_17750  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
I6I06_23280  HAD family phosphatase [KO:K20866] [EC:3.1.3.10]
I6I06_08350  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
I6I06_27670  ROK family protein [KO:K00886] [EC:2.7.1.63]
I6I06_11180  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pgis00020  Citrate cycle (TCA cycle)
pgis00030  Pentose phosphate pathway
pgis00500  Starch and sucrose metabolism
pgis00620  Pyruvate metabolism
pgis00640  Propanoate metabolism
pgis00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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