Entry
Name
ABC transporters - Pseudomonas protegens Cab57
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Pseudomonas protegens Cab57 [GN:
ppro ]
Gene
PPC_1748 sulfate ABC transporter periplasmic sulfate-binding protein [KO:K02048 ]
PPC_0285 taurine ABC transporter, periplasmic binding protein [KO:K15551 ]
PPC_5884 ssuA; aliphatic sulfonates ABC transporter periplasmic sulfonate-binding protein [KO:K15553 ]
PPC_2596 QAT family ABC transporter substrate-binding protein [KO:K15553 ]
PPC_1436 aliphatic sulfonates family ABC transporter periplasmic substrate-binding protein [KO:K15553 ]
PPC_1441 aliphatic sulfonate ABC transporter substrate-binding protein [KO:K15553 ]
PPC_0216 atsR; sulfate ester ABC transporter periplasmic sulfate ester-binding protein AtsR [KO:K15553 ]
PPC_2955 ABC transporter periplasmic sulfonate-binding protein [KO:K15553 ]
PPC_5882 ssuC; aliphatic sulfonates ABC transporter permease [KO:K15554 ]
PPC_1431 ssuC2; aliphatic sulfonates ABC transporter permease [KO:K15554 ]
PPC_0215 atsB; sulfate ester ABC transporter permease AtsB [KO:K15554 ]
PPC_3436 molybdenum ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
PPC_5912 FeT family ferric iron ABC transporter periplasmic ferric iron-binding protein [KO:K02012 ]
PPC_0590 fbpA; iron ABC transporter substrate-binding protein [KO:K02012 ]
PPC_5159 polyamine ABC transporter periplasmic polyamine-binding protein [KO:K11069 ]
PPC_6099 potF; putrescine ABC transporter periplasmic putrescine-binding protein [KO:K11073 ]
PPC_5872 spermidine/putrescine-binding periplasmic protein [KO:K11073 ]
PPC_5873 potF1; putrescine ABC transporter periplasmic putrescine-binding protein [KO:K11073 ]
PPC_2380 potF3; putrescine ABC transporter periplasmic putrescine-binding protein [KO:K11073 ]
PPC_2705 putrescine ABC transporter periplasmic putrescine-binding protein [KO:K11073 ]
PPC_3609 putrescine ABC transporter periplasmic putrescine-binding protein [KO:K11073 ]
PPC_3730 putrescine ABC transporter periplasmic putrescine-binding protein [KO:K11073 ]
PPC_5698 glycine betaine ABC transporter substrate-binding protein [KO:K02002 ]
PPC_5708 choX; choline ABC transporter periplasmic choline-binding protein [KO:K02002 ]
PPC_2598 QAT family ABC transporter substrate-binding protein [KO:K02002 ]
PPC_2651 ABC proline/glycine betaine transport system, periplasmic component [KO:K02002 ]
PPC_0416 histidine transporter, periplasmic histidine-binding protein [KO:K02002 ]
PPC_1764 QAT family ABC transporter substrate-binding protein [KO:K02002 ]
PPC_0032 glycine/betaine ABC transporter substrate-binding protein [KO:K02002 ]
PPC_2597 ABC transporter, quaternary amine uptake transporter (QAT) family, ATPase/permease fusion protein [KO:K02000 K02001 ] [EC:7.6.2.9 ]
PPC_0417 binding-protein dependent transport system inner membrane protein [KO:K02001 ]
PPC_0904 substrate-binding region of ABC-type glycine betaine transport system [KO:K05845 ]
PPC_0903 binding-protein dependent transport system inner membrane protein [KO:K05846 ]
PPC_0905 binding-protein dependent transport system inner membrane protein [KO:K05846 ]
PPC_0902 opuCA; glycine betaine/carnitine/choline ABC transporter ATP-binding protein [KO:K05847 ] [EC:7.6.2.9 ]
PPC_4716 sugar ABC transporter ATP-binding protein [KO:K10112 ] [EC:7.5.2.-]
PPC_0103 mammalian cell entry related domain-containing protein [KO:K02067 ]
PPC_0956 yrbF; toluene transporter subunit: ATP-binding component of ABC superfamily [KO:K02065 ]
PPC_4719 glucose ABC transporter periplasmic glucose-binding protein [KO:K17315 ]
PPC_2114 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
PPC_2116 permease component of ribose/xylose/arabinose/galactoside ABC-type transporter [KO:K10440 ]
PPC_2640 sugar ABC transporter periplasmic sugar-binding protein [KO:K17213 ]
PPC_2641 ABC-type sugar transport system, ATPase component [KO:K17215 ]
PPC_6072 pstS; phosphate ABC transporter substrate-binding protein [KO:K02040 ]
PPC_6071 binding-protein dependent transport system inner membrane protein [KO:K02037 ]
PPC_6070 binding-protein dependent transport system inner membrane protein [KO:K02038 ]
PPC_1318 hisM; histidine/lysine/arginine/ornithine ABC transporter permease HisM [KO:K10015 ]
PPC_3087 histidine/lysine/arginine/ornithine ABC transporter permease HisM [KO:K10015 ]
PPC_3088 hisQ1; histidine ABC transporter, permease protein HisQ [KO:K10016 ]
PPC_1320 hisJ; histidine ABC transporter periplasmic histidine-binding protein HisJ [KO:K10014 ]
PPC_3089 amino acid ABC transporter substrate-binding protein [KO:K10014 ]
PPC_4882 gltK; glutamate/aspartate ABC transporter permease GltK [KO:K10002 ]
PPC_1085 yhdW; extracellular solute-binding protein, family 3 [KO:K09969 ]
PPC_1086 aapQ; general L-amino acid ABC transporter, permease protein AapQ [KO:K09970 ]
PPC_1087 aapM; general L-amino acid ABC transporter permease AapM [KO:K09971 ]
PPC_5862 periplasmic amino acid-binding protein, PAAT family [KO:K02424 ]
PPC_1079 cationic amino acid ABC transporter periplasmic binding protein [KO:K10022 ]
PPC_4625 lysine-arginine-ornithine-binding periplasmic protein [KO:K10022 ]
PPC_2292 cationic amino acid ABC transporter periplasmic binding protein [KO:K10022 ]
PPC_4623 polar amino acid ABC transporter inner membrane subunit [KO:K10023 ]
PPC_4624 polar amino acid ABC transporter inner membrane subunit [KO:K10024 ]
PPC_0352 amino acid ABC transporter substrate-binding protein [KO:K23055 ]
PPC_0610 livJ; branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
PPC_1354 braC; leucine ABC transporter subunit substrate-binding protein LivK [KO:K01999 ]
PPC_2671 branched chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
PPC_3669 leucine ABC transporter subunit substrate-binding protein LivK [KO:K01999 ]
PPC_3815 branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
PPC_0611 livH; high-affinity branched-chain amino acid ABC transporter permease LivH [KO:K01997 ]
PPC_1353 braD; branched-chain amino acid ABC transporter permease [KO:K01997 ]
PPC_2669 branched-chain amino acid ABC transporter permease [KO:K01997 ]
PPC_3816 branched-chain amino acid ABC transporter permease [KO:K01997 ]
PPC_2670 livM; branched-chain amino acid ABC transporter, permease protein [KO:K01998 ]
PPC_0612 livM; high-affinity branched-chain amino acid ABC transporter permease LivM [KO:K01998 ]
PPC_1352 livM; leucine/isoleucine/valine transporter permease subunit [KO:K01998 ]
PPC_3817 branched-chain amino acid ABC transporter permease [KO:K01998 ]
PPC_0613 livG; high affinity branched-chain amino acid ABC transporter ATP-binding protein LivG [KO:K01995 ]
PPC_1351 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein [KO:K01995 ]
PPC_2668 livG; branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01995 ]
PPC_3818 branched-chain amino acid ABC transporter ATP-binding protein [KO:K01995 ]
PPC_2672 branched-chain amino acid ABC transporter ATP-binding protein [KO:K01996 ]
PPC_1350 high-affinity amino acid ABC transporter ATP-binding protein [KO:K01996 ]
PPC_0614 livF; high affinity branched-chain amino acid ABC transporter ATP-binding protein LivF [KO:K01996 ]
PPC_3819 branched-chain amino acid ABC transporter ATP-binding protein [KO:K01996 ]
PPC_0249 metI1; D-methionine ABC transporter permease MetI [KO:K02072 ]
PPC_0076 metI2; D-methionine ABC transporter permease MetI [KO:K02072 ]
PPC_4263 binding-protein-dependent transport system inner membrane protein [KO:K02072 ]
PPC_0250 metN1; D-methionine ABC transporter ATP-binding protein MetN [KO:K02071 ]
PPC_0077 metN2; DL-methionine transporter ATP-binding subunit [KO:K02071 ]
PPC_0651 branched-chain amino acid ABC transporter periplasmic amino acid-binding protein [KO:K11959 ]
PPC_0650 branched-chain amino acid ABC transporter permease [KO:K11960 ]
PPC_0649 branched-chain amino acid ABC transporter permease [KO:K11961 ]
PPC_0648 branched-chain amino acid ABC transporter ATP-binding protein [KO:K11962 ]
PPC_0647 branched-chain amino acid ABC transporter ATP-binding protein [KO:K11963 ]
PPC_0912 dipeptide ABC transporter periplasmic dipeptide-binding protein [KO:K12368 ]
PPC_0914 nikA2; nickel ABC transporter periplasmic nickel-binding protein [KO:K12368 ]
PPC_0915 nikA3; nickel ABC transporter periplasmic nickel-binding protein [KO:K12368 ]
PPC_0909 dppD; dipeptide ABC transporter ATP-binding protein DppD [KO:K12371 ]
PPC_3327 binding-protein dependent transport system inner membrane protein [KO:K13894 ]
PPC_3709 binding-protein dependent transport system inner membrane protein [KO:K13894 ]
PPC_3710 binding-protein dependent transport system inner membrane protein [KO:K13895 ]
PPC_3765 fepB; iron-enterobactin transporter periplasmic binding protein [KO:K23185 ]
PPC_3766 fepD; ferric enterobactin ABC transporter permease FepD [KO:K23186 ]
PPC_3767 fepG; ferric enterobactin ABC transporter permease FepG [KO:K23187 ]
PPC_0083 znuA; high-affinity zinc ABC transporter periplasmic zinc-binding protein ZnuA [KO:K09815 ]
PPC_0080 znuB; high-affinity zinc ABC transporter permease ZnuB [KO:K09816 ]
PPC_1988 TagG; ABC polysaccharide/polyol phosphate export system, permease component [KO:K09690 ]
PPC_1987 ABC-type polysaccharide/polyol phosphate transport system, ATPase componrnt [KO:K09691 ] [EC:7.5.2.14 ]
PPC_2033 LolC/E family lipoprotein releasing system, transmembrane protein [KO:K09808 ]
PPC_2035 LolC/E family lipoprotein releasing system, transmembrane protein [KO:K09808 ]
PPC_3649 pchH; ABC transporter permease/ATP-binding protein [KO:K14698 ] [EC:7.-.-.-]
PPC_3648 pchI; ABC transporter permease/ATP-binding protein [KO:K14699 ] [EC:7.-.-.-]
PPC_4191 pvdE; pyoverdine ABC transporter permease/ATP-binding protein PvdE [KO:K06160 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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