KEGG   PATHWAY: ptet00030
Entry
ptet00030                   Pathway                                
Name
Pentose phosphate pathway - Puntigrus tetrazona (Sumatra barb)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ptet00030  Pentose phosphate pathway
ptet00030

Module
ptet_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ptet00030]
ptet_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ptet00030]
ptet_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ptet00030]
ptet_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ptet00030]
Other DBs
GO: 0006098
Organism
Puntigrus tetrazona (Sumatra barb) [GN:ptet]
Gene
122323083  gpib; LOW QUALITY PROTEIN: glucose-6-phosphate isomerase b [KO:K01810] [EC:5.3.1.9]
122330803  gpia; glucose-6-phosphate isomerase a isoform X1 [KO:K01810] [EC:5.3.1.9]
122328458  g6pd; glucose-6-phosphate 1-dehydrogenase isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
122329422  pgls; LOW QUALITY PROTEIN: 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
122352563  6-phosphogluconolactonase-like [KO:K01057] [EC:3.1.1.31]
122347317  h6pd; GDH/6PGL endoplasmic bifunctional protein [KO:K13937] [EC:1.1.1.47 3.1.1.31]
122329074  pgd; 6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
122351985  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
122328805  tktb; transketolase-like protein 2 [KO:K00615] [EC:2.2.1.1]
122354522  tkta; transketolase [KO:K00615] [EC:2.2.1.1]
122335815  taldo1; transaldolase [KO:K00616] [EC:2.2.1.2]
122356949  rpia; ribose-5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
122344750  shpk; sedoheptulokinase [KO:K11214] [EC:2.7.1.14]
122343395  dera; deoxyribose-phosphate aldolase isoform X1 [KO:K01619] [EC:4.1.2.4]
122334872  rbks; ribokinase [KO:K00852] [EC:2.7.1.15]
122347090  pgm1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
122358138  phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
122351468  pgm2; phosphoglucomutase-2 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
122358074  prps1b; ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
122345651  prps1a; ribose-phosphate pyrophosphokinase 1a isoform X1 [KO:K00948] [EC:2.7.6.1]
122346722  rgn; regucalcin [KO:K01053] [EC:3.1.1.17]
122347015  glyctk; glycerate kinase [KO:K11529] [EC:2.7.1.165]
122326589  aldocb; fructose-bisphosphate aldolase C-B [KO:K01623] [EC:4.1.2.13]
122333417  aldoab; aldolase a, fructose-bisphosphate, b [KO:K01623] [EC:4.1.2.13]
122335812  aldoaa; aldolase a, fructose-bisphosphate, a isoform X1 [KO:K01623] [EC:4.1.2.13]
122357897  fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
122358024  LOW QUALITY PROTEIN: fructose-bisphosphate aldolase B-like [KO:K01623] [EC:4.1.2.13]
122358472  aldoca; fructose-bisphosphate aldolase C-A [KO:K01623] [EC:4.1.2.13]
122349147  fbp2; fructose-1,6-bisphosphatase isozyme 2 isoform X1 [KO:K03841] [EC:3.1.3.11]
122349148  fbp1a; fructose-1,6-bisphosphatase 1a [KO:K03841] [EC:3.1.3.11]
122345498  fbp1b; fructose-1,6-bisphosphatase 1b [KO:K03841] [EC:3.1.3.11]
122326497  ATP-dependent 6-phosphofructokinase, platelet type-like [KO:K00850] [EC:2.7.1.11]
122329322  pfkma; phosphofructokinase, muscle a isoform X1 [KO:K00850] [EC:2.7.1.11]
122329735  pfkpa; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
122333104  pfkla; ATP-dependent 6-phosphofructokinase, liver type isoform X1 [KO:K00850] [EC:2.7.1.11]
122347133  pfkmb; phosphofructokinase, muscle b isoform X1 [KO:K00850] [EC:2.7.1.11]
122362652  pfkpb; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
122354143  ATP-dependent 6-phosphofructokinase, liver type-like [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ptet00010  Glycolysis / Gluconeogenesis
ptet00040  Pentose and glucuronate interconversions
ptet00052  Galactose metabolism
ptet00230  Purine metabolism
ptet00240  Pyrimidine metabolism
ptet00340  Histidine metabolism
ptet00630  Glyoxylate and dicarboxylate metabolism
ptet00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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