KEGG   PATHWAY: rfl00010
Entry
rfl00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Roseomonas fluvialis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rfl00010  Glycolysis / Gluconeogenesis
rfl00010

Module
rfl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rfl00010]
rfl_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rfl00010]
rfl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rfl00010]
Other DBs
GO: 0006096 0006094
Organism
Roseomonas fluvialis [GN:rfl]
Gene
Rmf_49670  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Rmf_22660  fructose-1,6-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
Rmf_14000  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
Rmf_32340  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Rmf_08530  gapA_1; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
Rmf_08460  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Rmf_40530  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
Rmf_20140  eno_1; enolase [KO:K01689] [EC:4.2.1.11]
Rmf_32230  eno_2; enolase [KO:K01689] [EC:4.2.1.11]
Rmf_28330  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Rmf_38330  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Rmf_23870  pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
Rmf_32210  pdhA2; pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
Rmf_32200  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
Rmf_32190  acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
Rmf_32170  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Rmf_44260  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Rmf_25660  ferredoxin oxidoreductase [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Rmf_25650  2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Rmf_30470  adhC2; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Rmf_24240  NAD-dependent alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
Rmf_19180  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Rmf_21020  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Rmf_09490  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
Rmf_11360  acsA_1; AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
Rmf_17000  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
Rmf_49230  acsA_2; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Rmf_07380  pauA; pimeloyl-CoA synthetase [KO:K24012] [EC:6.2.1.13]
Rmf_12230  bioW; 6-carboxyhexanoate--CoA ligase [KO:K24012] [EC:6.2.1.13]
Rmf_16470  acyl-CoA synthetase [KO:K24012] [EC:6.2.1.13]
Rmf_41680  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Rmf_05360  pckA; phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
rfl00020  Citrate cycle (TCA cycle)
rfl00030  Pentose phosphate pathway
rfl00500  Starch and sucrose metabolism
rfl00620  Pyruvate metabolism
rfl00640  Propanoate metabolism
rfl00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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