PATHWAY: rhl00470
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Entry
rhl00470 Pathway
Name
D-Amino acid metabolism - Rhizobium favelukesii
Class
Metabolism; Metabolism of other amino acids
BRITE hierarchy
Pathway map
rhl00470
D-Amino acid metabolism
Ortholog table
Other DBs
GO:
0046416
Organism
Rhizobium favelukesii [GN:
rhl
]
Gene
LPU83_pLPU83c0773
alr; alanine racemase [KO:
K01775
] [EC:
5.1.1.1
]
LPU83_pLPU83d1801
dadB; Alanine racemase, catabolic [KO:
K01775
] [EC:
5.1.1.1
]
LPU83_1384
alr; alanine racemase [KO:
K01775
] [EC:
5.1.1.1
]
LPU83_2540
dat; D-alanine transaminase [KO:
K00824
] [EC:
2.6.1.21
]
LPU83_2728
ddl; D-alanine-D-alanine ligase [KO:
K01921
] [EC:
6.3.2.4
]
LPU83_2292
glsA; glutaminase [KO:
K01425
] [EC:
3.5.1.2
]
LPU83_2306
purQ; phosphoribosylformylglycinamidine synthase I [KO:
K23265
] [EC:
6.3.5.3
3.5.1.2
]
LPU83_2288
murI; glutamate racemase [KO:
K01776
] [EC:
5.1.1.3
]
LPU83_2736
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase [KO:
K01925
] [EC:
6.3.2.9
]
LPU83_2256
mandelate racemase [KO:
K19802
] [EC:
5.1.1.20
5.1.1.25
]
LPU83_2654
asr; aspartate racemase [KO:
K01779
] [EC:
5.1.1.13
]
LPU83_3982
dapF; diaminopimelate epimerase [KO:
K01778
] [EC:
5.1.1.7
]
LPU83_3822
lysA; diaminopimelate decarboxylase [KO:
K01586
] [EC:
4.1.1.20
]
LPU83_pLPU83d0221
pyridoxal-dependent decarboxylase, exosortase A system-associated [KO:
K01586
] [EC:
4.1.1.20
]
LPU83_1797
hydroxyproline-2-epimerase [KO:
K12658
] [EC:
5.1.1.8
]
LPU83_0070
dapA1; dihydrodipicolinate synthase [KO:
K21062
] [EC:
3.5.4.22
]
LPU83_0073
putative semialdehyde dehydrogenase protein [KO:
K13877
] [EC:
1.2.1.26
]
LPU83_pLPU83d1800
dadA; D-amino acid dehydrogenase small subunit [KO:
K00285
] [EC:
1.4.5.1
]
Compound
C00022
Pyruvate
C00025
L-Glutamate
C00026
2-Oxoglutarate
C00036
Oxaloacetate
C00037
Glycine
C00041
L-Alanine
C00047
L-Lysine
C00049
L-Aspartate
C00062
L-Arginine
C00064
L-Glutamine
C00065
L-Serine
C00073
L-Methionine
C00077
L-Ornithine
C00079
L-Phenylalanine
C00084
Acetaldehyde
C00097
L-Cysteine
C00133
D-Alanine
C00134
Putrescine
C00135
L-Histidine
C00148
L-Proline
C00166
Phenylpyruvate
C00188
L-Threonine
C00217
D-Glutamate
C00402
D-Aspartate
C00431
5-Aminopentanoate
C00433
2,5-Dioxopentanoate
C00515
D-Ornithine
C00624
N-Acetyl-L-glutamate
C00666
LL-2,6-Diaminoheptanedioate
C00680
meso-2,6-Diaminoheptanedioate
C00692
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
C00739
D-Lysine
C00740
D-Serine
C00763
D-Proline
C00792
D-Arginine
C00793
D-Cysteine
C00819
D-Glutamine
C00820
D-Threonine
C00855
D-Methionine
C00993
D-Alanyl-D-alanine
C01110
5-Amino-2-oxopentanoic acid
C01157
Hydroxyproline
C01180
4-Methylthio-2-oxobutanoic acid
C01667
Bacitracin
C01672
Cadaverine
C01726
D-Lombricine
C02237
5-Oxo-D-proline
C02265
D-Phenylalanine
C02855
N-Phospho-D-lombricine
C03239
6-Amino-2-oxohexanoate
C03341
2-Amino-4-oxopentanoic acid
C03440
cis-4-Hydroxy-D-proline
C03564
1-Pyrroline-2-carboxylate
C03771
5-Guanidino-2-oxopentanoate
C03933
5-D-Glutamyl-D-glutamyl-peptide
C03943
(2R,4S)-2,4-Diaminopentanoate
C04260
O-D-Alanyl-poly(ribitol phosphate)
C04282
1-Pyrroline-4-hydroxy-2-carboxylate
C04457
D-Alanyl-alanyl-poly(glycerolphosphate)
C05161
(2R,5S)-2,5-Diaminohexanoate
C05620
N-Acetyl-D-phenylalanine
C05825
2-Amino-5-oxohexanoate
C05939
Linatine
C05941
2-Oxo-4-hydroxy-5-aminovalerate
C05942
Pyrrole-2-carboxylate
C06419
D-Histidine
C22024
Staphylopine
C22025
(2S)-2-Amino-4-{[(1R)-1-carboxy-2-(1H-imidazol-4-yl)ethyl]amino}butanoate
C22611
N-Acetyl-D-glutamate
Reference
PMID:
33788945
Authors
Miyamoto T, Homma H
Title
D-Amino acid metabolism in bacteria.
Journal
J Biochem 170:5-13 (2021)
DOI:
10.1093/jb/mvab043
Reference
PMID:
27230378
Authors
Ghssein G, Brutesco C, Ouerdane L, Fojcik C, Izaute A, Wang S, Hajjar C, Lobinski R, Lemaire D, Richaud P, Voulhoux R, Espaillat A, Cava F, Pignol D, Borezee-Durant E, Arnoux P
Title
Biosynthesis of a broad-spectrum nicotianamine-like metallophore in Staphylococcus aureus.
Journal
Science 352:1105-9 (2016)
DOI:
10.1126/science.aaf1018
Related
pathway
rhl00010
Glycolysis / Gluconeogenesis
rhl00020
Citrate cycle (TCA cycle)
rhl00250
Alanine, aspartate and glutamate metabolism
rhl00260
Glycine, serine and threonine metabolism
rhl00270
Cysteine and methionine metabolism
rhl00300
Lysine biosynthesis
rhl00310
Lysine degradation
rhl00330
Arginine and proline metabolism
rhl00340
Histidine metabolism
rhl00360
Phenylalanine metabolism
rhl00550
Peptidoglycan biosynthesis
rhl00620
Pyruvate metabolism
KO pathway
ko00470
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