KEGG   PATHWAY: rhx00630
Entry
rhx00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhizobium sp. N731
Class
Metabolism; Carbohydrate metabolism
Pathway map
rhx00630  Glyoxylate and dicarboxylate metabolism
rhx00630

Module
rhx_M00012  Glyoxylate cycle [PATH:rhx00630]
rhx_M00621  Glycine cleavage system [PATH:rhx00630]
rhx_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rhx00630]
Other DBs
GO: 0046487 0043648
Organism
Rhizobium sp. N731 [GN:rhx]
Gene
AMK02_CH00756  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
AMK02_CH03881  AMP-dependent synthetase/ligase protein [KO:K01895] [EC:6.2.1.1]
AMK02_CH04248  acsA; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AMK02_CH00053  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
AMK02_CH04018  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AMK02_CH01996  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
AMK02_CH02251  citrate synthase protein [KO:K01647] [EC:2.3.3.1]
AMK02_CH02252  citA; citrate synthase [KO:K01647] [EC:2.3.3.1]
AMK02_CH04068  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AMK02_CH00592  fadA; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
AMK02_CH04144  phbA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AMK02_PB00085  acetyl-CoA acetyltransferase protein [KO:K00626] [EC:2.3.1.9]
AMK02_PD00015  vraB; acetyl-CoA C-acetyltransferase VraB [KO:K00626] [EC:2.3.1.9]
AMK02_CH04145  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
AMK02_CH01658  methylmalonyl-CoA epimerase protein [KO:K05606] [EC:5.1.99.1]
AMK02_CH02295  pccA; propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
AMK02_CH02301  pccB; propionyl-CoA carboxylase beta subunit [KO:K01966] [EC:6.4.1.3 2.1.3.15]
AMK02_PA00143  bhbA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
AMK02_CH00847  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
AMK02_CH00848  glcE; glycolate oxidase FAD-binding subunit GlcE [KO:K11472] [EC:1.1.99.14]
AMK02_CH00849  glcF; glycolate oxidase iron-sulfur subunit GlcF [KO:K11473] [EC:1.1.99.14]
AMK02_CH00143  gyaR-1; glyoxylate reductase 1 [KO:K00015] [EC:1.1.1.26]
AMK02_CH00186  ghrA-1; bifunctional glyoxylate/hydroxypyruvate reductase A 1 [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AMK02_PD00291  ghrA-2; bifunctional glyoxylate/hydroxypyruvate reductase A 2 [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AMK02_CH00884  phosphoglycolate phosphatase protein [KO:K01091] [EC:3.1.3.18]
AMK02_CH02449  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AMK02_CH02304  phosphoglycolate phosphatase protein [KO:K01091] [EC:3.1.3.18]
AMK02_CH00748  glutamine synthetase GlnA protein [KO:K01915] [EC:6.3.1.2]
AMK02_CH01358  glutamine synthetase GlnA protein [KO:K01915] [EC:6.3.1.2]
AMK02_CH02164  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AMK02_CH02986  glutamine synthetase GlnA protein [KO:K01915] [EC:6.3.1.2]
AMK02_CH03194  glnII; glutamine synthetase 2 [KO:K01915] [EC:6.3.1.2]
AMK02_CH01557  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AMK02_CH02313  gcvP; glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
AMK02_CH02311  gcvT; glycine-cleavage system protein T [KO:K00605] [EC:2.1.2.10]
AMK02_CH04008  dihydrolipoamide dehydrogenase protein [KO:K00382] [EC:1.8.1.4]
AMK02_CH02009  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMK02_PB00090  lpdV; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMK02_CH02312  gcvH; glycine-cleavage system protein H [KO:K02437]
AMK02_CH03449  hydroxypyruvate isomerase protein [KO:K01816] [EC:5.3.1.22]
AMK02_CH01844  ttuD; hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
AMK02_PD00294  ttuC; trifunctional D-malate dehydrogenase/tartrate dehydrogenase/tartrate decarboxylase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AMK02_CH03754  eda; bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AMK02_CH03979  FdsD family formate dehydrogenase delta subunit protein [KO:K00126] [EC:1.17.1.9]
AMK02_CH03981  formate dehydrogenase alpha subunit protein [KO:K00123] [EC:1.17.1.9]
AMK02_CH03982  formate dehydrogenase beta subunit protein [KO:K00124]
AMK02_CH03983  formate dehydrogenase gamma subunit protein [KO:K00127]
AMK02_CH00229  purU-1; formyltetrahydrofolate deformylase 1 [KO:K01433] [EC:3.5.1.10]
AMK02_PE00431  purU-2; formyltetrahydrofolate deformylase 2 [KO:K01433] [EC:3.5.1.10]
AMK02_PE00085  hutG; formiminoglutamase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rhx00010  Glycolysis / Gluconeogenesis
rhx00020  Citrate cycle (TCA cycle)
rhx00030  Pentose phosphate pathway
rhx00053  Ascorbate and aldarate metabolism
rhx00071  Fatty acid degradation
rhx00230  Purine metabolism
rhx00250  Alanine, aspartate and glutamate metabolism
rhx00260  Glycine, serine and threonine metabolism
rhx00620  Pyruvate metabolism
rhx00750  Vitamin B6 metabolism
rhx00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system