KEGG   PATHWAY: rko00310
Entry
rko00310                    Pathway                                
Name
Lysine degradation - Rhodococcus koreensis
Class
Metabolism; Amino acid metabolism
Pathway map
rko00310  Lysine degradation
rko00310

Other DBs
GO: 0006554
Organism
Rhodococcus koreensis [GN:rko]
Gene
JWS14_34145  aldehyde dehydrogenase family protein [KO:K26061]
JWS14_38605  2-oxo acid dehydrogenase subunit E2 [KO:K00658] [EC:2.3.1.61]
JWS14_45280  2-oxo acid dehydrogenase subunit E2 [KO:K00658] [EC:2.3.1.61]
JWS14_02570  2-oxo acid dehydrogenase subunit E2 [KO:K00658] [EC:2.3.1.61]
JWS14_47150  2-oxo acid dehydrogenase subunit E2 [KO:K00658] [EC:2.3.1.61]
JWS14_47830  2-oxo acid dehydrogenase subunit E2 [KO:K00658] [EC:2.3.1.61]
JWS14_11195  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JWS14_15230  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JWS14_16905  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JWS14_17580  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JWS14_28915  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JWS14_42325  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JWS14_03745  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JWS14_12005  acyl-CoA dehydrogenase family protein [KO:K00252] [EC:1.3.8.6]
JWS14_13740  acyl-CoA dehydrogenase [KO:K00252] [EC:1.3.8.6]
JWS14_17680  acyl-CoA dehydrogenase family protein [KO:K00252] [EC:1.3.8.6]
JWS14_24995  enoyl-CoA hydratase [KO:K01692] [EC:4.2.1.17]
JWS14_07885  enoyl-CoA hydratase [KO:K01692] [EC:4.2.1.17]
JWS14_22360  enoyl-CoA hydratase [KO:K01692] [EC:4.2.1.17]
JWS14_24710  enoyl-CoA hydratase/isomerase family protein [KO:K01692] [EC:4.2.1.17]
JWS14_35010  enoyl-CoA hydratase/isomerase family protein [KO:K01692] [EC:4.2.1.17]
JWS14_38870  enoyl-CoA hydratase/isomerase family protein [KO:K01692] [EC:4.2.1.17]
JWS14_22910  enoyl-CoA hydratase/isomerase family protein [KO:K01782] [EC:1.1.1.35 4.2.1.17 5.1.2.3]
JWS14_43825  enoyl-CoA hydratase/isomerase family protein [KO:K01782] [EC:1.1.1.35 4.2.1.17 5.1.2.3]
JWS14_09595  thiolase family protein [KO:K00626] [EC:2.3.1.9]
JWS14_10825  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_13210  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_15920  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_15930  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_16260  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_17635  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_18230  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_18910  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_21285  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_22905  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_24660  thiolase family protein [KO:K00626] [EC:2.3.1.9]
JWS14_25325  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_25915  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
JWS14_25940  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
JWS14_28495  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_28785  thiolase family protein [KO:K00626] [EC:2.3.1.9]
JWS14_31810  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
JWS14_31935  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_38930  thiolase family protein [KO:K00626] [EC:2.3.1.9]
JWS14_41370  thiolase family protein [KO:K00626] [EC:2.3.1.9]
JWS14_43605  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_43830  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_44380  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_46060  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_06895  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_07495  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
JWS14_18540  FAD-dependent oxidoreductase [KO:K00468] [EC:1.13.12.2]
JWS14_18535  carbon-nitrogen hydrolase family protein [KO:K01506] [EC:3.5.1.30]
JWS14_14705  aldehyde dehydrogenase family protein [KO:K00137] [EC:1.2.1.19]
JWS14_18020  aminobutyraldehyde dehydrogenase [KO:K00137] [EC:1.2.1.19]
JWS14_38410  aldehyde dehydrogenase family protein [KO:K00137] [EC:1.2.1.19]
JWS14_04090  aminobutyraldehyde dehydrogenase [KO:K00137] [EC:1.2.1.19]
JWS14_30670  gabT; 4-aminobutyrate--2-oxoglutarate transaminase [KO:K07250] [EC:2.6.1.19 2.6.1.22 2.6.1.48]
JWS14_10195  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_20960  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_21595  succinate-semialdehyde dehydrogenase (NADP(+)) [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_24505  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_26600  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_29350  aldehyde dehydrogenase family protein [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_30535  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_30660  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_36230  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_41515  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_42480  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_44835  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_46245  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_48120  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_04320  NAD-dependent succinate-semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
JWS14_20695  acyl-CoA hydrolase [KO:K18014] [EC:4.3.1.14]
JWS14_45620  acyl-CoA hydrolase [KO:K18014] [EC:4.3.1.14]
JWS14_08980  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_10805  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
JWS14_16015  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_16080  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
JWS14_16220  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_16645  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_20740  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_25025  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_25710  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
JWS14_25755  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
JWS14_28405  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
JWS14_38960  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_41485  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
JWS14_41660  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_42060  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_44075  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
JWS14_44210  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
JWS14_44425  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
JWS14_00300  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_03985  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JWS14_14580  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Compound
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00037  Glycine
C00042  Succinate
C00047  L-Lysine
C00068  Thiamin diphosphate
C00136  Butanoyl-CoA
C00164  Acetoacetate
C00322  2-Oxoadipate
C00332  Acetoacetyl-CoA
C00408  L-Pipecolate
C00431  5-Aminopentanoate
C00449  N6-(L-1,3-Dicarboxypropyl)-L-lysine
C00450  (S)-2,3,4,5-Tetrahydropyridine-2-carboxylate
C00487  Carnitine
C00489  Glutarate
C00527  Glutaryl-CoA
C00739  D-Lysine
C00877  Crotonoyl-CoA
C00956  L-2-Aminoadipate
C00990  5-Aminopentanamide
C01087  (R)-2-Hydroxyglutarate
C01142  (3S)-3,6-Diaminohexanoate
C01144  (S)-3-Hydroxybutanoyl-CoA
C01149  4-Trimethylammoniobutanal
C01181  4-Trimethylammoniobutanoate
C01186  (3S,5S)-3,5-Diaminohexanoate
C01211  Procollagen 5-hydroxy-L-lysine
C01259  (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
C01672  Cadaverine
C02188  Protein lysine
C02727  N6-Acetyl-L-lysine
C03087  5-Acetamidopentanoate
C03196  (S)-2-Hydroxyglutarate
C03239  6-Amino-2-oxohexanoate
C03273  5-Oxopentanoate
C03366  5-Phosphooxy-L-lysine
C03656  (S)-5-Amino-3-oxohexanoic acid
C03793  N6,N6,N6-Trimethyl-L-lysine
C04020  D-Lysopine
C04076  L-2-Aminoadipate 6-semialdehyde
C04092  Delta1-Piperideine-2-carboxylate
C04487  5-(D-Galactosyloxy)-L-lysine-procollagen
C05161  (2R,5S)-2,5-Diaminohexanoate
C05231  L-3-Aminobutyryl-CoA
C05544  Protein N6-methyl-L-lysine
C05545  Protein N6,N6-dimethyl-L-lysine
C05546  Protein N6,N6,N6-trimethyl-L-lysine
C05548  6-Acetamido-2-oxohexanoate
C05825  2-Amino-5-oxohexanoate
C06157  [Dihydrolipoyllysine-residue succinyltransferase] S-glutaryldihydrolipoyllysine
C12455  5-Aminopentanal
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16741  L-Hydroxylysine
C22667  4-Carboxy-1-hydroxybutyryl-ThPP
Reference
PMID:11802770
  Authors
Vaz FM, Wanders RJ.
  Title
Carnitine biosynthesis in mammals.
  Journal
Biochem J 361:417-29 (2002)
DOI:10.1042/bj3610417
Reference
PMID:1682209
  Authors
Large PJ, Robertson A.
  Title
The route of lysine breakdown in Candida tropicalis.
  Journal
FEMS Microbiol Lett 66:209-13 (1991)
DOI:10.1111/j.1574-6968.1990.tb03998.x
Related
pathway
rko00020  Citrate cycle (TCA cycle)
rko00300  Lysine biosynthesis
rko00311  Penicillin and cephalosporin biosynthesis
rko00780  Biotin metabolism
KO pathway
ko00310   
LinkDB

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