KEGG   PATHWAY: rsz00710
Entry
rsz00710                    Pathway                                
Name
Carbon fixation by Calvin cycle - Raphanus sativus (radish)
Class
Metabolism; Energy metabolism
Pathway map
rsz00710  Carbon fixation by Calvin cycle
rsz00710

Module
rsz_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:rsz00710]
rsz_M00168  CAM (Crassulacean acid metabolism), dark [PATH:rsz00710]
rsz_M00169  CAM (Crassulacean acid metabolism), light [PATH:rsz00710]
rsz_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:rsz00710]
rsz_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:rsz00710]
rsz_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:rsz00710]
Organism
Raphanus sativus (radish) [GN:rsz]
Gene
19816359  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
108854277  ribulose bisphosphate carboxylase small subunit, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
108854278  ribulose bisphosphate carboxylase small subunit, chloroplastic 2 isoform X1 [KO:K01602] [EC:4.1.1.39]
108830969  ribulose bisphosphate carboxylase small subunit, chloroplastic [KO:K01602] [EC:4.1.1.39]
108829688  ribulose bisphosphate carboxylase small subunit, chloroplastic 1-like [KO:K01602] [EC:4.1.1.39]
108840710  ribulose bisphosphate carboxylase small subunit 1A, chloroplastic [KO:K01602] [EC:4.1.1.39]
108848825  ribulose bisphosphate carboxylase small subunit, chloroplastic 2-like [KO:K01602] [EC:4.1.1.39]
108840532  ribulose bisphosphate carboxylase small subunit 1B, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
130494487  phosphoglycerate kinase 1, chloroplastic-like [KO:K00927] [EC:2.7.2.3]
108818528  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
108843155  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
108812738  phosphoglycerate kinase 1, chloroplastic [KO:K00927] [EC:2.7.2.3]
108805109  phosphoglycerate kinase 1, chloroplastic [KO:K00927] [EC:2.7.2.3]
108861506  phosphoglycerate kinase 1, chloroplastic [KO:K00927] [EC:2.7.2.3]
130494797  phosphoglycerate kinase 1, chloroplastic-like [KO:K00927] [EC:2.7.2.3]
108813245  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
108818779  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [KO:K00134] [EC:1.2.1.12]
108805328  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
108811673  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
108835834  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
108823033  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
108839846  LOW QUALITY PROTEIN: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [KO:K00134] [EC:1.2.1.12]
108815794  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [KO:K00134] [EC:1.2.1.12]
130496964  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
130510660  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
108812248  glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic isoform X1 [KO:K05298] [EC:1.2.1.13]
108854059  glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic [KO:K05298] [EC:1.2.1.13]
108822559  glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic [KO:K05298] [EC:1.2.1.13]
108805608  glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic [KO:K05298] [EC:1.2.1.13]
108810222  glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic isoform X1 [KO:K05298] [EC:1.2.1.13]
130504155  glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic [KO:K05298] [EC:1.2.1.13]
108863280  LOW QUALITY PROTEIN: fructose-bisphosphate aldolase 8, cytosolic [KO:K01623] [EC:4.1.2.13]
108822059  fructose-bisphosphate aldolase 2, chloroplastic [KO:K01623] [EC:4.1.2.13]
108854423  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
108854721  fructose-bisphosphate aldolase 2, chloroplastic [KO:K01623] [EC:4.1.2.13]
108816350  fructose-bisphosphate aldolase 4, cytosolic [KO:K01623] [EC:4.1.2.13]
108842858  fructose-bisphosphate aldolase 5, cytosolic [KO:K01623] [EC:4.1.2.13]
108813216  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
108811784  fructose-bisphosphate aldolase 1, chloroplastic isoform X1 [KO:K01623] [EC:4.1.2.13]
108835009  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
108848619  fructose-bisphosphate aldolase 8, cytosolic [KO:K01623] [EC:4.1.2.13]
108836888  fructose-bisphosphate aldolase 8, cytosolic [KO:K01623] [EC:4.1.2.13]
108825415  fructose-bisphosphate aldolase 2, chloroplastic [KO:K01623] [EC:4.1.2.13]
130497800  fructose-bisphosphate aldolase 8, cytosolic-like [KO:K01623] [EC:4.1.2.13]
130507354  fructose-bisphosphate aldolase 8, cytosolic [KO:K01623] [EC:4.1.2.13]
130494641  thiol protease aleurain-like [KO:K01623] [EC:4.1.2.13]
108829788  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
108856520  fructose-1,6-bisphosphatase 1, chloroplastic [KO:K03841] [EC:3.1.3.11]
108862890  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
108856572  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
130498546  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
130506716  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
108862662  transketolase-1, chloroplastic [KO:K00615] [EC:2.2.1.1]
108812301  transketolase-2, chloroplastic [KO:K00615] [EC:2.2.1.1]
108854671  transketolase-1, chloroplastic [KO:K00615] [EC:2.2.1.1]
108811636  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
130511812  transketolase-1, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
108857414  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
108842225  LOW QUALITY PROTEIN: sedoheptulose-1,7-bisphosphatase, chloroplastic-like [KO:K01100] [EC:3.1.3.37]
108836715  sedoheptulose-1,7-bisphosphatase, chloroplastic-like [KO:K01100] [EC:3.1.3.37]
108863357  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
108836666  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
108835770  probable ribose-5-phosphate isomerase 4, chloroplastic [KO:K01807] [EC:5.3.1.6]
108811940  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
108811941  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
108818768  probable ribose-5-phosphate isomerase 1 [KO:K01807] [EC:5.3.1.6]
108812425  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
130506002  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
108862862  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
108819071  phosphoribulokinase, chloroplastic-like [KO:K00855] [EC:2.7.1.19]
108853920  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
108854823  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
108848673  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
108856736  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
108814888  triosephosphate isomerase, cytosolic-like [KO:K01803] [EC:5.3.1.1]
108812805  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
108837464  ribulose-5-phosphate-3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
108817059  ribulose-5-phosphate-3-epimerase, chloroplastic-like [KO:K01783] [EC:5.1.3.1]
108824053  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
130505539  LOW QUALITY PROTEIN: ribulose-5-phosphate-3-epimerase, chloroplastic-like [KO:K01783] [EC:5.1.3.1]
108846026  uncharacterized protein LOC108846026 [KO:K00616] [EC:2.2.1.2]
108847735  uncharacterized protein LOC108847735 [KO:K00616] [EC:2.2.1.2]
108817482  uncharacterized protein LOC108817482 [KO:K00616] [EC:2.2.1.2]
108822275  phosphoenolpyruvate carboxylase 1 [KO:K01595] [EC:4.1.1.31]
108854419  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
108808926  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
108831926  phosphoenolpyruvate carboxylase 3 [KO:K01595] [EC:4.1.1.31]
108816352  phosphoenolpyruvate carboxylase 4 [KO:K01595] [EC:4.1.1.31]
108832273  phosphoenolpyruvate carboxylase 4-like [KO:K01595] [EC:4.1.1.31]
108861345  phosphoenolpyruvate carboxylase 3 [KO:K01595] [EC:4.1.1.31]
130495043  phosphoenolpyruvate carboxylase 3 [KO:K01595] [EC:4.1.1.31]
130505820  phosphoenolpyruvate carboxylase 1 [KO:K01595] [EC:4.1.1.31]
108827901  aspartate aminotransferase, cytoplasmic isozyme 2 isoform X1 [KO:K14454] [EC:2.6.1.1]
108826346  aspartate aminotransferase, cytoplasmic isozyme 2 [KO:K14454] [EC:2.6.1.1]
108814416  aspartate aminotransferase, cytoplasmic isozyme 1 [KO:K14454] [EC:2.6.1.1]
108862339  aspartate aminotransferase 3, chloroplastic [KO:K14454] [EC:2.6.1.1]
108843465  aspartate aminotransferase, cytoplasmic isozyme 1 [KO:K14454] [EC:2.6.1.1]
108806755  phosphoenolpyruvate carboxykinase (ATP) 2 [KO:K01610] [EC:4.1.1.49]
108849902  phosphoenolpyruvate carboxykinase (ATP) 1-like [KO:K01610] [EC:4.1.1.49]
108856709  phosphoenolpyruvate carboxykinase (ATP) 2 [KO:K01610] [EC:4.1.1.49]
108841419  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
130502655  phosphoenolpyruvate carboxykinase (ATP) 2-like [KO:K01610] [EC:4.1.1.49]
130508323  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
108823135  alanine aminotransferase 1, mitochondrial [KO:K00814] [EC:2.6.1.2]
108838576  alanine aminotransferase 1, mitochondrial [KO:K00814] [EC:2.6.1.2]
108836469  alanine aminotransferase 1, mitochondrial [KO:K00814] [EC:2.6.1.2]
108822099  glutamate--glyoxylate aminotransferase 1 isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
108822100  glutamate--glyoxylate aminotransferase 1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
108825821  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
108808579  glutamate--glyoxylate aminotransferase 1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
108848596  LOW QUALITY PROTEIN: pyruvate, phosphate dikinase 1, chloroplastic [KO:K01006] [EC:2.7.9.1]
108842733  pyruvate, phosphate dikinase 1, chloroplastic [KO:K01006] [EC:2.7.9.1]
108818079  LOW QUALITY PROTEIN: NADP-dependent malic enzyme 4, chloroplastic [KO:K00029] [EC:1.1.1.40]
108836651  NADP-dependent malic enzyme 3 [KO:K00029] [EC:1.1.1.40]
108858490  NADP-dependent malic enzyme 2-like [KO:K00029] [EC:1.1.1.40]
108816562  NADP-dependent malic enzyme 2 [KO:K00029] [EC:1.1.1.40]
108822778  NADP-dependent malic enzyme 1 [KO:K00029] [EC:1.1.1.40]
108847713  NADP-dependent malic enzyme 2 [KO:K00029] [EC:1.1.1.40]
130497758  NADP-dependent malic enzyme 4, chloroplastic [KO:K00029] [EC:1.1.1.40]
108828026  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
108842484  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
108847633  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
108813306  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
108848561  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
108819428  malate dehydrogenase 1, cytoplasmic [KO:K00025] [EC:1.1.1.37]
108828327  malate dehydrogenase 1, cytoplasmic [KO:K00025] [EC:1.1.1.37]
108858754  malate dehydrogenase 1, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
108858764  malate dehydrogenase 1, cytoplasmic [KO:K00025] [EC:1.1.1.37]
108832452  malate dehydrogenase 1, cytoplasmic [KO:K00025] [EC:1.1.1.37]
108828185  malate dehydrogenase 3, cytoplasmic [KO:K00025] [EC:1.1.1.37]
130505786  malate dehydrogenase 1, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
108855905  malate dehydrogenase 1, peroxisomal [KO:K00026] [EC:1.1.1.37]
108818532  malate dehydrogenase 2, glyoxysomal [KO:K00026] [EC:1.1.1.37]
108822930  malate dehydrogenase 1, mitochondrial [KO:K00026] [EC:1.1.1.37]
108842356  malate dehydrogenase 2, glyoxysomal [KO:K00026] [EC:1.1.1.37]
108813294  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
108833761  malate dehydrogenase 1, mitochondrial [KO:K00026] [EC:1.1.1.37]
108859076  malate dehydrogenase 1, mitochondrial [KO:K00026] [EC:1.1.1.37]
108828697  NAD-dependent malic enzyme 2, mitochondrial [KO:K00028] [EC:1.1.1.39]
108827160  NAD-dependent malic enzyme 1, mitochondrial [KO:K00028] [EC:1.1.1.39]
108847837  LOW QUALITY PROTEIN: NAD-dependent malic enzyme 2, mitochondrial [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
rsz00010  Glycolysis / Gluconeogenesis
rsz00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rsz00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

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