KEGG   PATHWAY: rsz00940
Entry
rsz00940                    Pathway                                
Name
Phenylpropanoid biosynthesis - Raphanus sativus (radish)
Description
Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.
Class
Metabolism; Biosynthesis of other secondary metabolites
Pathway map
rsz00940  Phenylpropanoid biosynthesis
rsz00940

Module
rsz_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:rsz00940]
rsz_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:rsz00940]
Other DBs
GO: 0009699
Organism
Raphanus sativus (radish) [GN:rsz]
Gene
108854852  phenylalanine ammonia-lyase 2 [KO:K10775] [EC:4.3.1.24]
108862526  phenylalanine ammonia-lyase 2 [KO:K10775] [EC:4.3.1.24]
108855076  phenylalanine ammonia-lyase 1 [KO:K10775] [EC:4.3.1.24]
108812387  phenylalanine ammonia-lyase 1 [KO:K10775] [EC:4.3.1.24]
108857697  phenylalanine ammonia-lyase 4 isoform X1 [KO:K10775] [EC:4.3.1.24]
108849675  trans-cinnamate 4-monooxygenase [KO:K00487] [EC:1.14.14.91]
108848885  trans-cinnamate 4-monooxygenase [KO:K00487] [EC:1.14.14.91]
108812700  trans-cinnamate 4-monooxygenase [KO:K00487] [EC:1.14.14.91]
108847879  trans-cinnamate 4-monooxygenase [KO:K00487] [EC:1.14.14.91]
108817856  4-coumarate--CoA ligase 3 [KO:K01904] [EC:6.2.1.12]
108825885  4-coumarate--CoA ligase-like 7 isoform X1 [KO:K01904] [EC:6.2.1.12]
108825946  4-coumarate--CoA ligase-like 1 [KO:K01904] [EC:6.2.1.12]
108805208  4-coumarate--CoA ligase 4-like isoform X1 [KO:K01904] [EC:6.2.1.12]
108818568  4-coumarate--CoA ligase-like 6 [KO:K01904] [EC:6.2.1.12]
108862381  4-coumarate--CoA ligase 1 [KO:K01904] [EC:6.2.1.12]
108862454  4-coumarate--CoA ligase 4 [KO:K01904] [EC:6.2.1.12]
108862456  4-coumarate--CoA ligase 4-like [KO:K01904] [EC:6.2.1.12]
108828363  4-coumarate--CoA ligase-like 7 [KO:K01904] [EC:6.2.1.12]
108813800  4-coumarate--CoA ligase-like 9 [KO:K01904] [EC:6.2.1.12]
130494832  4-coumarate--CoA ligase 4-like [KO:K01904] [EC:6.2.1.12]
130496933  4-coumarate--CoA ligase-like 9 [KO:K01904] [EC:6.2.1.12]
130499449  4-coumarate--CoA ligase-like 1 [KO:K01904] [EC:6.2.1.12]
108826500  spermidine hydroxycinnamoyl transferase-like [KO:K13065] [EC:2.3.1.133]
108847369  shikimate O-hydroxycinnamoyltransferase isoform X1 [KO:K13065] [EC:2.3.1.133]
108847370  shikimate O-hydroxycinnamoyltransferase isoform X2 [KO:K13065] [EC:2.3.1.133]
108812355  shikimate O-hydroxycinnamoyltransferase [KO:K13065] [EC:2.3.1.133]
108859971  spermidine hydroxycinnamoyl transferase-like [KO:K13065] [EC:2.3.1.133]
130494423  shikimate O-hydroxycinnamoyltransferase-like [KO:K13065] [EC:2.3.1.133]
108858042  cytochrome P450 98A3-like [KO:K09754] [EC:1.14.14.96]
108848401  cytochrome P450 98A3 [KO:K09754] [EC:1.14.14.96]
108847330  cytochrome P450 98A3 [KO:K09754] [EC:1.14.14.96]
108855892  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
108845841  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
108839933  LOW QUALITY PROTEIN: caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
108816113  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
108831286  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
108852001  caffeoylshikimate esterase isoform X1 [KO:K18368] [EC:3.1.1.-]
108817207  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
108814390  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
108819347  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
108860521  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
130506139  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
130507596  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
108847356  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
130511787  caffeoylshikimate esterase-like isoform X1 [KO:K18368] [EC:3.1.1.-]
108819811  probable caffeoyl-CoA O-methyltransferase At4g26220 [KO:K00588] [EC:2.1.1.104]
108822083  putative caffeoyl-CoA O-methyltransferase At1g67980 isoform X1 [KO:K00588] [EC:2.1.1.104]
108821914  caffeoyl-CoA O-methyltransferase 1 [KO:K00588] [EC:2.1.1.104]
108819073  putative caffeoyl-CoA O-methyltransferase At1g67980 isoform X1 [KO:K00588] [EC:2.1.1.104]
108819091  putative caffeoyl-CoA O-methyltransferase At1g67980 [KO:K00588] [EC:2.1.1.104]
108816183  caffeoyl-CoA O-methyltransferase 1 [KO:K00588] [EC:2.1.1.104]
108837709  putative caffeoyl-CoA O-methyltransferase At1g67980 [KO:K00588] [EC:2.1.1.104]
108849060  caffeoyl-CoA O-methyltransferase 1 [KO:K00588] [EC:2.1.1.104]
130499786  putative caffeoyl-CoA O-methyltransferase At1g67980 [KO:K00588] [EC:2.1.1.104]
130503110  caffeoyl-CoA O-methyltransferase 1-like [KO:K00588] [EC:2.1.1.104]
108811215  cinnamoyl-CoA reductase 1 isoform X1 [KO:K09753] [EC:1.2.1.44]
108816249  cinnamoyl-CoA reductase 2 [KO:K09753] [EC:1.2.1.44]
108810958  cinnamoyl-CoA reductase 1 [KO:K09753] [EC:1.2.1.44]
108825600  cinnamoyl-CoA reductase 2 [KO:K09753] [EC:1.2.1.44]
108856219  aldehyde dehydrogenase family 2 member C4 [KO:K12355] [EC:1.2.1.68]
130501088  aldehyde dehydrogenase family 2 member C4 [KO:K12355] [EC:1.2.1.68]
108854719  cytochrome P450 84A1 [KO:K09755] [EC:1.14.-.-]
108814215  cytochrome P450 84A4 [KO:K09755] [EC:1.14.-.-]
108843707  cytochrome P450 84A1 [KO:K09755] [EC:1.14.-.-]
108849143  cytochrome P450 84A1 [KO:K09755] [EC:1.14.-.-]
108840420  flavone 3'-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
108842003  flavone 3'-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
108855334  flavone 3'-O-methyltransferase 1 [KO:K13066] [EC:2.1.1.68 2.1.1.4]
108847745  flavone 3'-O-methyltransferase 1 [KO:K13066] [EC:2.1.1.68 2.1.1.4]
108849034  flavone 3'-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
108855432  flavone 3'-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
130500633  flavone 3'-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
130507220  flavone 3'-O-methyltransferase 1-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
108840209  cinnamyl alcohol dehydrogenase 7 [KO:K00083] [EC:1.1.1.195]
108809626  cinnamyl alcohol dehydrogenase 2 [KO:K00083] [EC:1.1.1.195]
108821113  cinnamyl alcohol dehydrogenase 5 [KO:K00083] [EC:1.1.1.195]
108823627  probable cinnamyl alcohol dehydrogenase 1 [KO:K00083] [EC:1.1.1.195]
108855825  cinnamyl alcohol dehydrogenase 5 [KO:K00083] [EC:1.1.1.195]
108856788  cinnamyl alcohol dehydrogenase 4 [KO:K00083] [EC:1.1.1.195]
108854371  LOW QUALITY PROTEIN: probable cinnamyl alcohol dehydrogenase 9 [KO:K00083] [EC:1.1.1.195]
108819546  cinnamyl alcohol dehydrogenase 8 [KO:K00083] [EC:1.1.1.195]
108830312  probable cinnamyl alcohol dehydrogenase 6 [KO:K00083] [EC:1.1.1.195]
130501400  cinnamyl alcohol dehydrogenase 5-like [KO:K00083] [EC:1.1.1.195]
130502391  probable cinnamyl alcohol dehydrogenase 6 [KO:K00083] [EC:1.1.1.195]
108826456  cinnamyl alcohol dehydrogenase 7-like [KO:K00083] [EC:1.1.1.195]
130510942  probable cinnamyl alcohol dehydrogenase 9 [KO:K00083] [EC:1.1.1.195]
108819070  cinnamyl alcohol dehydrogenase 7 [KO:K00083] [EC:1.1.1.195]
108839370  berberine bridge enzyme-like 13 [KO:K22395] [EC:1.1.1.195]
108854832  LOW QUALITY PROTEIN: berberine bridge enzyme-like 15 [KO:K22395] [EC:1.1.1.195]
108813107  LOW QUALITY PROTEIN: berberine bridge enzyme-like 15 [KO:K22395] [EC:1.1.1.195]
108862180  berberine bridge enzyme-like 13 [KO:K22395] [EC:1.1.1.195]
108860944  1-Cys peroxiredoxin PER1 [KO:K11188] [EC:1.11.1.7 1.11.1.27 3.1.1.-]
108832096  peroxidase 41 [KO:K00430] [EC:1.11.1.7]
130502879  peroxidase 41-like [KO:K00430] [EC:1.11.1.7]
108809975  peroxidase 4 [KO:K00430] [EC:1.11.1.7]
108827029  peroxidase 45 [KO:K00430] [EC:1.11.1.7]
108821367  LOW QUALITY PROTEIN: peroxidase 1 [KO:K00430] [EC:1.11.1.7]
108823880  peroxidase 73 [KO:K00430] [EC:1.11.1.7]
108826107  peroxidase 72-like [KO:K00430] [EC:1.11.1.7]
108810717  peroxidase 65-like [KO:K00430] [EC:1.11.1.7]
108819400  peroxidase 50 [KO:K00430] [EC:1.11.1.7]
108810931  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
108814260  peroxidase A2 [KO:K00430] [EC:1.11.1.7]
108823133  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
108842189  peroxidase 43 [KO:K00430] [EC:1.11.1.7]
108829767  peroxidase C2 [KO:K00430] [EC:1.11.1.7]
108826581  probable peroxidase 61 [KO:K00430] [EC:1.11.1.7]
108831628  peroxidase 34 [KO:K00430] [EC:1.11.1.7]
108839710  peroxidase 11-like [KO:K00430] [EC:1.11.1.7]
108846257  peroxidase 67-like isoform X1 [KO:K00430] [EC:1.11.1.7]
108849532  peroxidase 63 [KO:K00430] [EC:1.11.1.7]
108844285  peroxidase 22 [KO:K00430] [EC:1.11.1.7]
108844308  peroxidase 22 [KO:K00430] [EC:1.11.1.7]
108846695  peroxidase 57 [KO:K00430] [EC:1.11.1.7]
108840542  peroxidase 40 [KO:K00430] [EC:1.11.1.7]
108844948  peroxidase 67-like isoform X1 [KO:K00430] [EC:1.11.1.7]
108856351  peroxidase 4-like [KO:K00430] [EC:1.11.1.7]
108860722  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
108849746  peroxidase 45 [KO:K00430] [EC:1.11.1.7]
108860949  peroxidase 29 [KO:K00430] [EC:1.11.1.7]
108851058  probable peroxidase 26 [KO:K00430] [EC:1.11.1.7]
108814494  peroxidase 53 [KO:K00430] [EC:1.11.1.7]
108816787  LOW QUALITY PROTEIN: peroxidase 56 [KO:K00430] [EC:1.11.1.7]
108816805  LOW QUALITY PROTEIN: peroxidase 13 [KO:K00430] [EC:1.11.1.7]
108819873  peroxidase 49-like [KO:K00430] [EC:1.11.1.7]
108812503  peroxidase 72 [KO:K00430] [EC:1.11.1.7]
108806074  peroxidase 72 [KO:K00430] [EC:1.11.1.7]
108844734  peroxidase 37 [KO:K00430] [EC:1.11.1.7]
108806568  peroxidase 17 [KO:K00430] [EC:1.11.1.7]
108823303  peroxidase 31 [KO:K00430] [EC:1.11.1.7]
108823311  peroxidase 66 [KO:K00430] [EC:1.11.1.7]
108823323  peroxidase 67 [KO:K00430] [EC:1.11.1.7]
108825704  peroxidase 39 [KO:K00430] [EC:1.11.1.7]
108825710  peroxidase 11 [KO:K00430] [EC:1.11.1.7]
108853674  peroxidase 45 [KO:K00430] [EC:1.11.1.7]
108854709  peroxidase 49 [KO:K00430] [EC:1.11.1.7]
108820816  peroxidase 66 [KO:K00430] [EC:1.11.1.7]
108832849  probable peroxidase 61 [KO:K00430] [EC:1.11.1.7]
108840874  LOW QUALITY PROTEIN: peroxidase 44 [KO:K00430] [EC:1.11.1.7]
108844182  peroxidase 21 [KO:K00430] [EC:1.11.1.7]
108849562  peroxidase 21 isoform X1 [KO:K00430] [EC:1.11.1.7]
108849600  peroxidase 17 [KO:K00430] [EC:1.11.1.7]
108839942  peroxidase 56-like [KO:K00430] [EC:1.11.1.7]
108842408  peroxidase 47 [KO:K00430] [EC:1.11.1.7]
108826458  peroxidase 65 [KO:K00430] [EC:1.11.1.7]
108837202  peroxidase 27-like [KO:K00430] [EC:1.11.1.7]
108854338  peroxidase C3 [KO:K00430] [EC:1.11.1.7]
108849996  peroxidase 44-like [KO:K00430] [EC:1.11.1.7]
108852257  putative Peroxidase 48 [KO:K00430] [EC:1.11.1.7]
108857825  peroxidase 3 [KO:K00430] [EC:1.11.1.7]
108833559  peroxidase 25-like [KO:K00430] [EC:1.11.1.7]
108850461  peroxidase 57-like [KO:K00430] [EC:1.11.1.7]
108852774  peroxidase 65-like [KO:K00430] [EC:1.11.1.7]
108813401  peroxidase 64 [KO:K00430] [EC:1.11.1.7]
108862910  peroxidase 28 [KO:K00430] [EC:1.11.1.7]
108860016  peroxidase 27 [KO:K00430] [EC:1.11.1.7]
108806163  peroxidase 30 [KO:K00430] [EC:1.11.1.7]
108807169  peroxidase 69 [KO:K00430] [EC:1.11.1.7]
108807220  peroxidase 19 [KO:K00430] [EC:1.11.1.7]
108837033  peroxidase 60 [KO:K00430] [EC:1.11.1.7]
108805602  peroxidase 27 [KO:K00430] [EC:1.11.1.7]
108813196  peroxidase 34 [KO:K00430] [EC:1.11.1.7]
108816617  LOW QUALITY PROTEIN: peroxidase 13-like [KO:K00430] [EC:1.11.1.7]
108813836  peroxidase 20 [KO:K00430] [EC:1.11.1.7]
108815035  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
108816178  peroxidase 64 [KO:K00430] [EC:1.11.1.7]
108818292  peroxidase 58 [KO:K00430] [EC:1.11.1.7]
108845168  peroxidase 6 [KO:K00430] [EC:1.11.1.7]
108850268  peroxidase 3 isoform X1 [KO:K00430] [EC:1.11.1.7]
108840928  peroxidase 41 [KO:K00430] [EC:1.11.1.7]
108830835  LOW QUALITY PROTEIN: peroxidase 71 [KO:K00430] [EC:1.11.1.7]
108828626  peroxidase 49 [KO:K00430] [EC:1.11.1.7]
108828655  peroxidase 12 [KO:K00430] [EC:1.11.1.7]
108829896  peroxidase 7 [KO:K00430] [EC:1.11.1.7]
108821574  peroxidase 10 [KO:K00430] [EC:1.11.1.7]
108806428  peroxidase 31-like [KO:K00430] [EC:1.11.1.7]
108806441  peroxidase 31-like [KO:K00430] [EC:1.11.1.7]
108809700  peroxidase 18 [KO:K00430] [EC:1.11.1.7]
108829208  peroxidase 62 isoform X1 [KO:K00430] [EC:1.11.1.7]
108844209  peroxidase 24 isoform X2 [KO:K00430] [EC:1.11.1.7]
108851906  peroxidase 25 [KO:K00430] [EC:1.11.1.7]
108853060  LOW QUALITY PROTEIN: peroxidase 44 [KO:K00430] [EC:1.11.1.7]
108840022  peroxidase N-like [KO:K00430] [EC:1.11.1.7]
108828710  peroxidase 32 [KO:K00430] [EC:1.11.1.7]
108840273  peroxidase 58 [KO:K00430] [EC:1.11.1.7]
108842549  peroxidase 55-like [KO:K00430] [EC:1.11.1.7]
108840715  peroxidase 57 [KO:K00430] [EC:1.11.1.7]
108840734  peroxidase 58 [KO:K00430] [EC:1.11.1.7]
108841925  peroxidase 9 [KO:K00430] [EC:1.11.1.7]
108860847  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
108856671  peroxidase 71 [KO:K00430] [EC:1.11.1.7]
108850047  peroxidase 1 [KO:K00430] [EC:1.11.1.7]
108854641  peroxidase 47 [KO:K00430] [EC:1.11.1.7]
108830155  peroxidase 47 [KO:K00430] [EC:1.11.1.7]
108855023  peroxidase E5 [KO:K00430] [EC:1.11.1.7]
108858406  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
108816030  peroxidase N [KO:K00430] [EC:1.11.1.7]
108817108  peroxidase 55 [KO:K00430] [EC:1.11.1.7]
108860147  peroxidase 3-like [KO:K00430] [EC:1.11.1.7]
130495057  peroxidase 7 [KO:K00430] [EC:1.11.1.7]
108862038  peroxidase 30 [KO:K00430] [EC:1.11.1.7]
108808176  peroxidase 27 [KO:K00430] [EC:1.11.1.7]
130496122  peroxidase 30-like [KO:K00430] [EC:1.11.1.7]
130496305  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
130498107  peroxidase 45-like [KO:K00430] [EC:1.11.1.7]
130499189  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
130499906  peroxidase 44 [KO:K00430] [EC:1.11.1.7]
130500854  peroxidase 7-like [KO:K00430] [EC:1.11.1.7]
130501873  peroxidase 49-like [KO:K00430] [EC:1.11.1.7]
130502406  peroxidase 71-like [KO:K00430] [EC:1.11.1.7]
130503023  peroxidase 57-like [KO:K00430] [EC:1.11.1.7]
130503091  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
130503092  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
130503221  peroxidase 71-like [KO:K00430] [EC:1.11.1.7]
130503507  peroxidase 4-like [KO:K00430] [EC:1.11.1.7]
130503699  peroxidase 22-like [KO:K00430] [EC:1.11.1.7]
130503945  peroxidase 49-like [KO:K00430] [EC:1.11.1.7]
130505397  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
130505913  peroxidase 47-like [KO:K00430] [EC:1.11.1.7]
130505959  peroxidase 47 [KO:K00430] [EC:1.11.1.7]
108840934  peroxidase 13-like [KO:K00430] [EC:1.11.1.7]
130494781  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
130506580  peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
130506703  peroxidase 44-like [KO:K00430] [EC:1.11.1.7]
130494793  peroxidase 44-like [KO:K00430] [EC:1.11.1.7]
130507538  putative Peroxidase 48 [KO:K00430] [EC:1.11.1.7]
108837229  peroxidase 42 [KO:K00430] [EC:1.11.1.7]
130508048  peroxidase 43 [KO:K00430] [EC:1.11.1.7]
130508226  peroxidase 47-like [KO:K00430] [EC:1.11.1.7]
130508259  peroxidase 49-like [KO:K00430] [EC:1.11.1.7]
130508992  peroxidase 3-like [KO:K00430] [EC:1.11.1.7]
130511037  probable peroxidase 61 [KO:K00430] [EC:1.11.1.7]
130512326  peroxidase 69 [KO:K00430] [EC:1.11.1.7]
130512530  peroxidase 70 [KO:K00430] [EC:1.11.1.7]
130512785  peroxidase 69-like [KO:K00430] [EC:1.11.1.7]
108826095  UDP-glycosyltransferase 72E2-like [KO:K12356] [EC:2.4.1.111]
108852453  UDP-glycosyltransferase 72E1-like [KO:K12356] [EC:2.4.1.111]
108840649  UDP-glycosyltransferase 72E1-like [KO:K12356] [EC:2.4.1.111]
108809515  UDP-glycosyltransferase 72E2 [KO:K12356] [EC:2.4.1.111]
108841875  UDP-glycosyltransferase 72E1-like [KO:K12356] [EC:2.4.1.111]
108809850  UDP-glycosyltransferase 72D1-like [KO:K12356] [EC:2.4.1.111]
108842855  UDP-glycosyltransferase 72C1 [KO:K12356] [EC:2.4.1.111]
108862217  UDP-glycosyltransferase 72D1-like [KO:K12356] [EC:2.4.1.111]
108829918  UDP-glycosyltransferase 72E1-like [KO:K12356] [EC:2.4.1.111]
108829363  UDP-glycosyltransferase 84A2 [KO:K13068] [EC:2.4.1.120]
108861420  UDP-glycosyltransferase 84A2 [KO:K13068] [EC:2.4.1.120]
108816111  LOW QUALITY PROTEIN: cytochrome P450 98A8 [KO:K15506] [EC:1.14.13.-]
Compound
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00223  p-Coumaroyl-CoA
C00315  Spermidine
C00323  Caffeoyl-CoA
C00406  Feruloyl-CoA
C00411  Sinapoyl-CoA
C00423  trans-Cinnamate
C00482  Sinapate
C00540  Cinnamoyl-CoA
C00590  Coniferyl alcohol
C00761  Coniferin
C00811  4-Coumarate
C00852  Chlorogenate
C00903  Cinnamaldehyde
C00933  Sinapine
C01175  1-O-Sinapoyl-beta-D-glucose
C01197  Caffeate
C01494  Ferulate
C01533  Syringin
C02325  Sinapyl alcohol
C02646  4-Coumaryl alcohol
C02666  Coniferyl aldehyde
C02887  Sinapoyl malate
C02947  4-Coumaroylshikimate
C04366  3-(2-Carboxyethenyl)-cis,cis-muconate
C05608  4-Hydroxycinnamyl aldehyde
C05610  Sinapoyl aldehyde
C05619  5-Hydroxyferulic acid
C05627  4-Hydroxystyrene
C05855  4-Hydroxycinnamyl alcohol 4-D-glucoside
C06224  3,4-Dihydroxystyrene
C10428  Anethole
C10434  5-O-Caffeoylshikimic acid
C10452  Estragole
C10453  Eugenol
C10454  Methyleugenol
C10469  Isoeugenol
C10478  Methylisoeugenol
C10945  Caffeic aldehyde
C12203  5-Hydroxyferuloyl-CoA
C12204  5-Hydroxyconiferaldehyde
C12205  5-Hydroxyconiferyl alcohol
C12206  Caffeyl alcohol
C12208  p-Coumaroyl quinic acid
C15804  p-Hydroxyphenyl lignin
C15805  Guaiacyl lignin
C15806  Syringyl lignin
C15807  5-Hydroxy-guaiacyl lignin
C16930  Chavicol
C18069  N1,N5,N10-Tricoumaroyl spermidine
C18070  N1,N5,N10-Tricaffeoyl spermidine
C18071  N1,N5,N10-Triferuloyl spermidine
C18072  N1,N5,N10-Tri(hydroxyferuloyl) spermidine
C18073  N1,N5-Di(hydroxyferuloyl)-N10-sinapoyl spermidine
C20225  Coniferyl acetate
C20464  Isochavicol
C20465  Coumaryl acetate
Reference
  Authors
Nair RB, Bastress KL, Ruegger MO, Denault JW, Chapple C.
  Title
The Arabidopsis thaliana REDUCED EPIDERMAL FLUORESCENCE1 gene encodes an aldehyde dehydrogenase involved in ferulic acid and sinapic acid biosynthesis.
  Journal
Plant Cell 16:544-54 (2004)
DOI:10.1105/tpc.017509
Reference
  Authors
Baucher M, Halpin C, Petit-Conil M, Boerjan W.
  Title
Lignin: genetic engineering and impact on pulping.
  Journal
Crit Rev Biochem Mol Biol 38:305-50 (2003)
DOI:10.1080/10409230391036757
Reference
  Authors
Rogers LA, Dubos C, Cullis IF, Surman C, Poole M, Willment J, Mansfield SD, Campbell MM.
  Title
Light, the circadian clock, and sugar perception in the control of lignin biosynthesis.
  Journal
J Exp Bot 56:1651-63 (2005)
DOI:10.1093/jxb/eri162
Reference
  Authors
Whetten R, Sederoff R.
  Title
Lignin Biosynthesis.
  Journal
Plant Cell 7:1001-1013 (1995)
DOI:10.1105/tpc.7.7.1001
Reference
PMID:8972602
  Authors
Lorenzen M, Racicot V, Strack D, Chapple C.
  Title
Sinapic acid ester metabolism in wild type and a sinapoylglucose-accumulating mutant of arabidopsis.
  Journal
Plant Physiol 112:1625-30 (1996)
DOI:10.1104/pp.112.4.1625
Reference
PMID:1477555
  Authors
Chapple CC, Vogt T, Ellis BE, Somerville CR.
  Title
An Arabidopsis mutant defective in the general phenylpropanoid pathway.
  Journal
Plant Cell 4:1413-24 (1992)
DOI:10.1105/tpc.4.11.1413
Reference
  Authors
Raes J, Rohde A, Christensen JH, Van de Peer Y, Boerjan W.
  Title
Genome-wide characterization of the lignification toolbox in Arabidopsis.
  Journal
Plant Physiol 133:1051-71 (2003)
DOI:10.1104/pp.103.026484
Reference
  Authors
Costa MA, Collins RE, Anterola AM, Cochrane FC, Davin LB, Lewis NG.
  Title
An in silico assessment of gene function and organization of the phenylpropanoid pathway metabolic networks in Arabidopsis thaliana and limitations thereof.
  Journal
Phytochemistry 64:1097-112 (2003)
DOI:10.1016/S0031-9422(03)00517-X
Reference
  Authors
Meyermans H, Morreel K, Lapierre C, Pollet B, De Bruyn A, Busson R, Herdewijn P, Devreese B, Van Beeumen J, Marita JM, Ralph J, Chen C, Burggraeve B, Van Montagu M, Messens E, Boerjan W.
  Title
Modifications in lignin and accumulation of phenolic glucosides in poplar xylem upon down-regulation of caffeoyl-coenzyme A O-methyltransferase, an enzyme involved in lignin biosynthesis.
  Journal
J Biol Chem 275:36899-909 (2000)
DOI:10.1074/jbc.M006915200
Reference
  Authors
Gachon CM, Langlois-Meurinne M, Henry Y, Saindrenan P.
  Title
Transcriptional co-regulation of secondary metabolism enzymes in Arabidopsis: functional and evolutionary implications.
  Journal
Plant Mol Biol 58:229-45 (2005)
DOI:10.1007/s11103-005-5346-5
Reference
  Authors
Li L, Popko JL, Umezawa T, Chiang VL.
  Title
5-hydroxyconiferyl aldehyde modulates enzymatic methylation for syringyl monolignol formation, a new view of monolignol biosynthesis in angiosperms.
  Journal
J Biol Chem 275:6537-45 (2000)
DOI:10.1074/jbc.275.9.6537
Reference
  Authors
Yamauchi K, Yasuda S, Fukushima K.
  Title
Evidence for the biosynthetic pathway from sinapic acid to syringyl lignin using labeled sinapic acid with stable isotope at both methoxy groups in Robinia pseudoacacia and Nerium indicum.
  Journal
J Agric Food Chem 50:3222-7 (2002)
DOI:10.1021/jf011565x
Reference
  Authors
Eckardt NA.
  Title
Probing the mysteries of lignin biosynthesis: the crystal structure of caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase provides new insights.
  Journal
Plant Cell 14:1185-9 (2002)
DOI:10.1105/tpc.140610
Related
pathway
rsz00130  Ubiquinone and other terpenoid-quinone biosynthesis
rsz00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rsz00941  Flavonoid biosynthesis
rsz00945  Stilbenoid, diarylheptanoid and gingerol biosynthesis
KO pathway
ko00940   
LinkDB

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