KEGG   PATHWAY: sawl00630
Entry
sawl00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Natronosalvus rutilus
Class
Metabolism; Carbohydrate metabolism
Pathway map
sawl00630  Glyoxylate and dicarboxylate metabolism
sawl00630

Module
sawl_M00621  Glycine cleavage system [PATH:sawl00630]
sawl_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sawl00630]
sawl_M00968  Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:sawl00630]
Other DBs
GO: 0046487 0043648
Organism
Natronosalvus rutilus [GN:sawl]
Gene
NGM29_11175  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NGM29_13800  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
NGM29_18160  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NGM29_18170  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NGM29_05070  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NGM29_00505  citrate synthase [KO:K01647] [EC:2.3.3.1]
NGM29_02775  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
NGM29_14080  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
NGM29_19055  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
NGM29_09035  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
NGM29_09045  thiolase family protein [KO:K00626] [EC:2.3.1.9]
NGM29_09450  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
NGM29_12425  thiolase family protein [KO:K00626] [EC:2.3.1.9]
NGM29_09470  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
NGM29_08980  VOC family protein [KO:K05606] [EC:5.1.99.1]
NGM29_13830  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
NGM29_18775  VOC family protein [KO:K05606] [EC:5.1.99.1]
NGM29_18785  VOC family protein [KO:K05606] [EC:5.1.99.1]
NGM29_18825  VOC family protein [KO:K05606] [EC:5.1.99.1]
NGM29_08775  acyl dehydratase [KO:K14449] [EC:4.2.1.148]
NGM29_14270  acetyl-CoA carboxylase biotin carboxylase subunit [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
NGM29_14255  acyl-CoA carboxylase subunit beta [KO:K19312] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
NGM29_14260  hypothetical protein [KO:K22568] [EC:6.4.1.2 6.4.1.3]
NGM29_17845  cobalamin B12-binding domain-containing protein [KO:K01849] [EC:5.4.99.2]
NGM29_13815  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
NGM29_17330  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
NGM29_08785  methylaspartate mutase subunit E [KO:K19268] [EC:5.4.99.1]
NGM29_08790  glmS; methylaspartate mutase subunit S [KO:K01846] [EC:5.4.99.1]
NGM29_08780  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
NGM29_08795  CoA transferase [KO:K19280] [EC:2.8.3.26]
NGM29_08770  aldolase/citrate lyase family protein [KO:K19281] [EC:4.1.3.24]
NGM29_12540  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
NGM29_15385  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
NGM29_15795  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
NGM29_09920  HAD hydrolase family protein [KO:K22223] [EC:3.1.3.18]
NGM29_14560  alanine--glyoxylate aminotransferase family protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
NGM29_09860  gltB; glutamate synthase large subunit [KO:K00284] [EC:1.4.7.1]
NGM29_04405  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
NGM29_13070  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NGM29_11110  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
NGM29_11115  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
NGM29_02125  aminomethyltransferase family protein [KO:K00605] [EC:2.1.2.10]
NGM29_11075  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
NGM29_03020  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NGM29_18885  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NGM29_11070  gcvH; glycine cleavage system protein GcvH [KO:K02437]
NGM29_15050  DUF4147 domain-containing protein [KO:K11529] [EC:2.7.1.165]
NGM29_12510  HAD family hydrolase [KO:K26210] [EC:3.1.3.109]
NGM29_12505  class II aldolase/adducin family protein [KO:K01636] [EC:4.1.2.-]
NGM29_09390  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
NGM29_04895  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
sawl00010  Glycolysis / Gluconeogenesis
sawl00020  Citrate cycle (TCA cycle)
sawl00030  Pentose phosphate pathway
sawl00053  Ascorbate and aldarate metabolism
sawl00071  Fatty acid degradation
sawl00230  Purine metabolism
sawl00250  Alanine, aspartate and glutamate metabolism
sawl00260  Glycine, serine and threonine metabolism
sawl00620  Pyruvate metabolism
sawl00710  Carbon fixation by Calvin cycle
sawl00750  Vitamin B6 metabolism
sawl00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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