KEGG   PATHWAY: scin02024
Entry
scin02024                   Pathway                                
Name
Quorum sensing - Streptomyces cinereoruber
Description
Quorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal molecules called autoinducers (AIs) that increase in concentration as a function of cell density. The most commonly studied AIs belong to one of the following three categories: acylated homoserine lactones, also referred to as AI-1, used by Gram-negative bacteria; peptide signals, used by Gram-positive bacteria; and AI-2, used by both Gram-negative and Gram-positive bacteria. QS can be divided into at least 4 steps: production of AIs by the bacterial cell; release of AIs, either actively or passively, into the surrounding environment; recognition of AIs by specific receptors; and leading to changes in gene regulation once they exceed a threshold concentration. The processes controlled by QS include virulence, competence, conjugation, antibiotic production, motility, sporulation, and biofilm formation.
Class
Cellular Processes; Cellular community - prokaryotes
Pathway map
scin02024  Quorum sensing
scin02024

Other DBs
GO: 0009372
Organism
Streptomyces cinereoruber [GN:scin]
Gene
CP977_09135  anthranilate synthase component I [KO:K01657] [EC:4.1.3.27]
CP977_30630  M23 family peptidase [KO:K08642] [EC:3.4.24.-]
CP977_15880  phenazine biosynthesis protein [KO:K20260]
CP977_09510  3-deoxy-7-phosphoheptulonate synthase class II [KO:K01626] [EC:2.5.1.54]
CP977_15850  phospho-2-dehydro-3-deoxyheptonate aldolase [KO:K01626] [EC:2.5.1.54]
CP977_15855  isochorismatase family protein [KO:K20261] [EC:3.3.2.15]
CP977_09525  phenazine-specific anthranilate synthase component I [KO:K13063] [EC:2.6.1.86]
CP977_15860  phenazine-specific anthranilate synthase component I [KO:K13063] [EC:2.6.1.86]
CP977_15905  PhzF family phenazine biosynthesis isomerase [KO:K06998] [EC:5.3.3.17]
CP977_15870  pdxH; pyridoxamine 5'-phosphate oxidase [KO:K20262] [EC:1.10.3.16]
CP977_26090  response regulator [KO:K07667]
CP977_16785  glutamate decarboxylase [KO:K01580] [EC:4.1.1.15]
CP977_29315  extracellular solute-binding protein [KO:K02055]
CP977_29325  ABC transporter permease subunit [KO:K02053]
CP977_29320  ABC transporter permease subunit [KO:K02054]
CP977_29330  ABC transporter ATP-binding protein [KO:K02052]
CP977_20005  hypothetical protein [KO:K01999]
CP977_08925  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
CP977_28180  branched-chain amino acid ABC transporter permease [KO:K01997]
CP977_08930  branched-chain amino acid ABC transporter permease [KO:K01997]
CP977_08935  branched-chain amino acid ABC transporter permease [KO:K01998]
CP977_28175  ABC transporter ATP-binding protein [KO:K01995]
CP977_08940  ABC transporter ATP-binding protein [KO:K01995]
CP977_28170  ABC transporter ATP-binding protein [KO:K01996]
CP977_08945  ABC transporter ATP-binding protein [KO:K01996]
CP977_30800  N-acyl homoserine lactonase family protein [KO:K13075] [EC:3.1.1.81]
CP977_28420  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
CP977_30390  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
CP977_32115  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
CP977_03530  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
CP977_09590  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
CP977_11435  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
CP977_15055  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
CP977_29800  Crp/Fnr family transcriptional regulator [KO:K10914]
CP977_16175  Crp/Fnr family transcriptional regulator [KO:K10914]
CP977_28300  class I SAM-dependent methyltransferase [KO:K20331] [EC:2.1.1.349]
CP977_06220  ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD [KO:K11752] [EC:3.5.4.26 1.1.1.193]
CP977_07565  DMT family transporter [KO:K09936]
CP977_22470  ABC transporter substrate-binding protein [KO:K15580]
CP977_22495  ABC transporter substrate-binding protein [KO:K15580]
CP977_22475  ABC transporter permease [KO:K15581]
CP977_22500  ABC transporter permease [KO:K15581]
CP977_22480  ABC transporter permease [KO:K15582]
CP977_22505  ABC transporter permease [KO:K15582]
CP977_22485  ABC transporter ATP-binding protein [KO:K15583]
CP977_22510  ABC transporter ATP-binding protein [KO:K15583]
CP977_22490  dipeptide ABC transporter ATP-binding protein [KO:K10823]
CP977_21285  peptide-binding protein [KO:K02035]
CP977_22460  ABC transporter family substrate-binding protein [KO:K02035]
CP977_22770  ABC transporter substrate-binding protein [KO:K02035]
CP977_24155  ABC transporter substrate-binding protein [KO:K02035]
CP977_25310  ABC transporter substrate-binding protein [KO:K02035]
CP977_31545  ABC transporter substrate-binding protein [KO:K02035]
CP977_03000  ABC transporter substrate-binding protein [KO:K02035]
CP977_05485  peptide-binding protein [KO:K02035]
CP977_05590  ABC transporter substrate-binding protein [KO:K02035]
CP977_07240  ABC transporter substrate-binding protein [KO:K02035]
CP977_07245  peptide-binding protein [KO:K02035]
CP977_07545  peptide-binding protein [KO:K02035]
CP977_22780  ABC transporter permease [KO:K02033]
CP977_24160  ABC transporter permease [KO:K02033]
CP977_25305  ABC transporter permease [KO:K02033]
CP977_31550  ABC transporter permease [KO:K02033]
CP977_02995  ABC transporter permease [KO:K02033]
CP977_05585  ABC transporter permease [KO:K02033]
CP977_22775  ABC transporter permease [KO:K02034]
CP977_24165  ABC transporter permease [KO:K02034]
CP977_25300  ABC transporter permease [KO:K02034]
CP977_31555  ABC transporter permease [KO:K02034]
CP977_02990  ABC transporter permease [KO:K02034]
CP977_05580  ABC transporter permease [KO:K02034]
CP977_22785  ABC transporter ATP-binding protein [KO:K02031 K02032]
CP977_24170  ABC transporter ATP-binding protein [KO:K02031]
CP977_25295  ABC transporter ATP-binding protein [KO:K02031]
CP977_31560  ABC transporter ATP-binding protein [KO:K02031]
CP977_02985  ABC transporter ATP-binding protein [KO:K02031 K02032]
CP977_05575  ABC transporter ATP-binding protein [KO:K02031 K02032]
CP977_24175  ATP-binding cassette domain-containing protein [KO:K02032]
CP977_31565  ATP-binding cassette domain-containing protein [KO:K02032]
CP977_12775  yidC; membrane protein insertase YidC [KO:K03217]
CP977_17550  yidC; membrane protein insertase YidC [KO:K03217]
CP977_29190  protease [KO:K14645] [EC:3.4.21.-]
CP977_07540  protease [KO:K14645] [EC:3.4.21.-]
CP977_02770  secD; protein translocase subunit SecD [KO:K12257]
CP977_20500  secE; preprotein translocase subunit SecE [KO:K03073]
CP977_08660  secG; preprotein translocase subunit SecG [KO:K03075]
CP977_20695  secY; preprotein translocase subunit SecY [KO:K03076]
CP977_06555  yajC; preprotein translocase subunit YajC [KO:K03210]
CP977_13320  secA; preprotein translocase subunit SecA [KO:K03070] [EC:7.4.2.8]
CP977_24840  ftsY; signal recognition particle-docking protein FtsY [KO:K03110]
CP977_24870  signal recognition particle protein [KO:K03106] [EC:3.6.5.4]
CP977_24280  phospholipase C, phosphocholine-specific [KO:K01114] [EC:3.1.4.3]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00059  Sulfate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00547  L-Noradrenaline
C00788  L-Adrenaline
C01019  L-Fucose
C11837  N-Butyryl-L-homoserine lactone
C11841  N-(3-Oxooctanoyl)homoserine lactone
C11844  N-Heptanoylhomoserine lactone
C11845  N-(3-Hydroxy-7-cis-tetradecenoyl)homoserine lactone
C11848  2-Heptyl-3-hydroxy-quinolone
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C18049  N-Acyl-L-homoserine lactone
C18206  cis-11-Methyl-2-dodecenoic acid
C20643  2-Heptyl-4(1H)-quinolone
C20677  N-(4-Coumaroyl)-L-homoserine lactone
C20959  (4S)-4-Hydroxy-5-phosphooxypentane-2,3-dione
C21195  N-(3-Hydroxybutanoyl)-L-homoserine lactone
C21197  N-Hexanoyl-L-homoserine lactone
C21198  N-(3-Oxohexanoyl)-L-homoserine lactone
C21199  N-Octanoyl-L-homoserine lactone
C21200  N-3-Hydroxyoctanoyl-L-homoserine lactone
C21201  N-3-Oxo-dodecanoyl-L-homoserine lactone
C21202  cis-2-Dodecenoic acid
C21220  AIP-1
C21221  CSP
C21222  CSP
C21223  Blp
C21224  SHP2
C21225  SHP3
C21226  cCF10
C21227  iCF10
C21228  cAD1
C21229  iAD1
C21230  ComX pheromone
C21231  PhrA pentapeptide
C21232  PhrC pentapeptide
C21233  PhrE pentapeptide
C21234  PhrF pentapeptide
C21235  PhrG pentapeptide
C21236  PhrH pentapeptide
C21237  PhrK pentapeptide
C21238  NprX peptide
C21239  PapR peptide
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21244  AgrD peptide
C21245  AgrD1 peptide
C21246  GBAP
C21382  R-THMF
Reference
  Authors
Pereira CS, Thompson JA, Xavier KB
  Title
AI-2-mediated signalling in bacteria.
  Journal
FEMS Microbiol Rev 37:156-81 (2013)
DOI:10.1111/j.1574-6976.2012.00345.x
Reference
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Verma SC, Miyashiro T
  Title
Quorum sensing in the squid-Vibrio symbiosis.
  Journal
Int J Mol Sci 14:16386-401 (2013)
DOI:10.3390/ijms140816386
Reference
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Norsworthy AN, Visick KL
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Gimme shelter: how Vibrio fischeri successfully navigates an animal's multiple environments.
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Front Microbiol 4:356 (2013)
DOI:10.3389/fmicb.2013.00356
Reference
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Papaioannou E, Utari PD, Quax WJ
  Title
Choosing an appropriate infection model to study quorum sensing inhibition in Pseudomonas infections.
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Int J Mol Sci 14:19309-40 (2013)
DOI:10.3390/ijms140919309
Reference
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Quinolones: from antibiotics to autoinducers.
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FEMS Microbiol Rev 35:247-74 (2011)
DOI:10.1111/j.1574-6976.2010.00247.x
Reference
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The formation of biofilms by Pseudomonas aeruginosa: a review of the natural and synthetic compounds interfering with control mechanisms.
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Biomed Res Int 2015:759348 (2015)
DOI:10.1155/2015/759348
Reference
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Whiteley M, Greenberg EP
  Title
Promoter specificity elements in Pseudomonas aeruginosa quorum-sensing-controlled genes.
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J Bacteriol 183:5529-34 (2001)
DOI:10.1128/JB.183.19.5529-5534.2001
Reference
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Phenazine-1-carboxamide production in the biocontrol strain Pseudomonas chlororaphis PCL1391 is regulated by multiple factors secreted into the growth medium.
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Mol Plant Microbe Interact 14:969-79 (2001)
DOI:10.1094/MPMI.2001.14.8.969
Reference
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Hughes DT, Clarke MB, Yamamoto K, Rasko DA, Sperandio V
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The QseC adrenergic signaling cascade in Enterohemorrhagic E. coli (EHEC).
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PLoS Pathog 5:e1000553 (2009)
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Reference
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Enterohemorrhagic Escherichia coli virulence regulation by two bacterial adrenergic kinases, QseC and QseE.
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Infect Immun 80:688-703 (2012)
DOI:10.1128/IAI.05921-11
Reference
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Fucose sensing regulates bacterial intestinal colonization.
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Nature 492:113-7 (2012)
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Reference
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Hirakawa H, Harwood CS, Pechter KB, Schaefer AL, Greenberg EP
  Title
Antisense RNA that affects Rhodopseudomonas palustris quorum-sensing signal receptor expression.
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Proc Natl Acad Sci U S A 109:12141-6 (2012)
DOI:10.1073/pnas.1200243109
Reference
  Authors
Danino VE, Wilkinson A, Edwards A, Downie JA
  Title
Recipient-induced transfer of the symbiotic plasmid pRL1JI in Rhizobium leguminosarum bv. viciae is regulated by a quorum-sensing relay.
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Mol Microbiol 50:511-25 (2003)
DOI:10.1046/j.1365-2958.2003.03699.x
Reference
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Quorum-sensing in Rhizobium.
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Antonie Van Leeuwenhoek 81:397-407 (2002)
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Reference
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Rodelas B, Lithgow JK, Wisniewski-Dye F, Hardman A, Wilkinson A, Economou A, Williams P, Downie JA
  Title
Analysis of quorum-sensing-dependent control of rhizosphere-expressed (rhi) genes in Rhizobium leguminosarum bv. viciae.
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J Bacteriol 181:3816-23 (1999)
DOI:10.1128/JB.181.12.3816-3823.1999
Reference
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Lang J, Faure D
  Title
Functions and regulation of quorum-sensing in Agrobacterium tumefaciens.
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Front Plant Sci 5:14 (2014)
DOI:10.3389/fpls.2014.00014
Reference
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Planamente S, Morera S, Faure D
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In planta fitness-cost of the Atu4232-regulon encoding for a selective GABA-binding sensor in Agrobacterium.
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Commun Integr Biol 6:e23692 (2013)
DOI:10.4161/cib.23692
Reference
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Barnard AM, Salmond GP
  Title
Quorum sensing in Erwinia species.
  Journal
Anal Bioanal Chem 387:415-23 (2007)
DOI:10.1007/s00216-006-0701-1
Reference
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Quorum sensing, virulence and secondary metabolite production in plant soft-rotting bacteria.
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Philos Trans R Soc Lond B Biol Sci 362:1165-83 (2007)
DOI:10.1098/rstb.2007.2042
Reference
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  Title
Identification and characterization of three novel EsaI/EsaR quorum-sensing controlled stewartan exopolysaccharide biosynthetic genes in Pantoea stewartii ssp. stewartii.
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Mol Microbiol 74:903-13 (2009)
DOI:10.1111/j.1365-2958.2009.06906.x
Reference
PMID:7665477
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Beck von Bodman S, Farrand SK
  Title
Capsular polysaccharide biosynthesis and pathogenicity in Erwinia stewartii require induction by an N-acylhomoserine lactone autoinducer.
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J Bacteriol 177:5000-8 (1995)
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Reference
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O'Grady EP, Viteri DF, Malott RJ, Sokol PA
  Title
Reciprocal regulation by the CepIR and CciIR quorum sensing systems in Burkholderia cenocepacia.
  Journal
BMC Genomics 10:441 (2009)
DOI:10.1186/1471-2164-10-441
Reference
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Malott RJ, Baldwin A, Mahenthiralingam E, Sokol PA
  Title
Characterization of the cciIR quorum-sensing system in Burkholderia cenocepacia.
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Infect Immun 73:4982-92 (2005)
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Deng Y, Schmid N, Wang C, Wang J, Pessi G, Wu D, Lee J, Aguilar C, Ahrens CH, Chang C, Song H, Eberl L, Zhang LH
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Cis-2-dodecenoic acid receptor RpfR links quorum-sensing signal perception with regulation of virulence through cyclic dimeric guanosine monophosphate turnover.
  Journal
Proc Natl Acad Sci U S A 109:15479-84 (2012)
DOI:10.1073/pnas.1205037109
Reference
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Suppiger A, Schmid N, Aguilar C, Pessi G, Eberl L
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Two quorum sensing systems control biofilm formation and virulence in members of the Burkholderia cepacia complex.
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Virulence 4:400-9 (2013)
DOI:10.4161/viru.25338
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Deng Y, Wu J, Tao F, Zhang LH
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Listening to a new language: DSF-based quorum sensing in Gram-negative bacteria.
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Chem Rev 111:160-73 (2011)
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Communication with a growing family: diffusible signal factor (DSF) signaling in bacteria.
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Trends Microbiol 19:145-52 (2011)
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Reference
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Kim J, Kim JG, Kang Y, Jang JY, Jog GJ, Lim JY, Kim S, Suga H, Nagamatsu T, Hwang I
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Quorum sensing and the LysR-type transcriptional activator ToxR regulate toxoflavin biosynthesis and transport in Burkholderia glumae.
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Mol Microbiol 54:921-34 (2004)
DOI:10.1111/j.1365-2958.2004.04338.x
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Kim J, Kang Y, Choi O, Jeong Y, Jeong JE, Lim JY, Kim M, Moon JS, Suga H, Hwang I
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Regulation of polar flagellum genes is mediated by quorum sensing and FlhDC in Burkholderia glumae.
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Mol Microbiol 64:165-79 (2007)
DOI:10.1111/j.1365-2958.2007.05646.x
Reference
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Stauff DL, Bassler BL
  Title
Quorum sensing in Chromobacterium violaceum: DNA recognition and gene regulation by the CviR receptor.
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J Bacteriol 193:3871-8 (2011)
DOI:10.1128/JB.05125-11
Reference
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Chen G, Swem LR, Swem DL, Stauff DL, O'Loughlin CT, Jeffrey PD, Bassler BL, Hughson FM
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A strategy for antagonizing quorum sensing.
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Mol Cell 42:199-209 (2011)
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Hao G, Burr TJ
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Regulation of long-chain N-acyl-homoserine lactones in Agrobacterium vitis.
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J Bacteriol 188:2173-83 (2006)
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Reference
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Savka MA, Le PT, Burr TJ
  Title
LasR receptor for detection of long-chain quorum-sensing signals: identification of N-acyl-homoserine lactones encoded by the avsI locus of Agrobacterium vitis.
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Curr Microbiol 62:101-10 (2011)
DOI:10.1007/s00284-010-9679-1
Reference
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Le KY, Otto M
  Title
Quorum-sensing regulation in staphylococci-an overview.
  Journal
Front Microbiol 6:1174 (2015)
DOI:10.3389/fmicb.2015.01174
Reference
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Queck SY, Jameson-Lee M, Villaruz AE, Bach TH, Khan BA, Sturdevant DE, Ricklefs SM, Li M, Otto M
  Title
RNAIII-independent target gene control by the agr quorum-sensing system: insight into the evolution of virulence regulation in Staphylococcus aureus.
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Mol Cell 32:150-8 (2008)
DOI:10.1016/j.molcel.2008.08.005
Reference
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Darkoh C, DuPont HL, Norris SJ, Kaplan HB
  Title
Toxin synthesis by Clostridium difficile is regulated through quorum signaling.
  Journal
MBio 6:e02569 (2015)
DOI:10.1128/mBio.02569-14
Reference
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Vidal JE, Shak JR, Canizalez-Roman A
  Title
The CpAL quorum sensing system regulates production of hemolysins CPA and PFO to build Clostridium perfringens biofilms.
  Journal
Infect Immun 83:2430-42 (2015)
DOI:10.1128/IAI.00240-15
Reference
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Ohtani K, Yuan Y, Hassan S, Wang R, Wang Y, Shimizu T
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Virulence gene regulation by the agr system in Clostridium perfringens.
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J Bacteriol 191:3919-27 (2009)
DOI:10.1128/JB.01455-08
Reference
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Li YH, Tian X
  Title
Quorum sensing and bacterial social interactions in biofilms.
  Journal
Sensors (Basel) 12:2519-38 (2012)
DOI:10.3390/s120302519
Reference
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Berg KH, Biornstad TJ, Johnsborg O, Havarstein LS
  Title
Properties and biological role of streptococcal fratricins.
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Appl Environ Microbiol 78:3515-22 (2012)
DOI:10.1128/AEM.00098-12
Reference
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Comparing the cariogenic species Streptococcus sobrinus and S. mutans on whole genome level.
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J Oral Microbiol 6:26189 (2014)
DOI:10.3402/jom.v6.26189
Reference
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Jimenez JC, Federle MJ
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Quorum sensing in group A Streptococcus.
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Front Cell Infect Microbiol 4:127 (2014)
DOI:10.3389/fcimb.2014.00127
Reference
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Peptide pheromone signaling in Streptococcus and Enterococcus.
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FEMS Microbiol Rev 38:473-92 (2014)
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Reference
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Reference
PMID:8885277
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Molecular characterization of group A streptococcal (GAS) oligopeptide permease (opp) and its effect on cysteine protease production.
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Reference
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Growth phase-dependent modulation of Rgg binding specificity in Streptococcus pyogenes.
  Journal
J Bacteriol 194:3961-71 (2012)
DOI:10.1128/JB.06709-11
Reference
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Clewell DB
  Title
Tales of conjugation and sex pheromones: A plasmid and enterococcal odyssey.
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Mob Genet Elements 1:38-54 (2011)
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Quorum sensing in Bacillus thuringiensis is required for completion of a full infectious cycle in the insect.
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Toxins (Basel) 6:2239-55 (2014)
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FEMS Microbiol Rev 34:134-49 (2010)
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J Bacteriol 185:4861-71 (2003)
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Mol Microbiol 65:1321-33 (2007)
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Peptides 25:1405-14 (2004)
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DOI:10.1086/592072
Related
pathway
scin00405  Phenazine biosynthesis
scin02040  Flagellar assembly
KO pathway
ko02024   
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