KEGG   PATHWAY: sfe00010
Entry
sfe00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Shigella flexneri 2002017 (serotype Fxv)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sfe00010  Glycolysis / Gluconeogenesis
sfe00010

Module
sfe_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sfe00010]
sfe_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sfe00010]
sfe_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sfe00010]
sfe_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sfe00010]
Other DBs
GO: 0006096 0006094
Organism
Shigella flexneri 2002017 (serotype Fxv) [GN:sfe]
Gene
SFxv_2701  glk; Glucokinase [KO:K00845] [EC:2.7.1.2]
SFxv_4557  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SFxv_4355  pfkA; 6-phosphofructokinase isozyme 1 [KO:K00850] [EC:2.7.1.11]
SFxv_1690  pfkB; 6-phosphofructokinase II [KO:K16370] [EC:2.7.1.11]
SFxv_4643  fbp; Fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
SFxv_4364  glpX; Fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
SFxv_3199  yggF; putative Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase-like protein [KO:K02446] [EC:3.1.3.11]
SFxv_2388  fbaB; Fructose-bisphosphate aldolase class 1 [KO:K11645] [EC:4.1.2.13]
SFxv_3189  fbaA; Fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
SFxv_4358  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SFxv_1630  gapA; Glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
SFxv_3190  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SFxv_0605  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
SFxv_4821  ytjC; putative phosphoglycerate mutase gpmB [KO:K15634] [EC:5.4.2.11]
SFxv_3979  gpmM; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
SFxv_3065  eno; Enolase [KO:K01689] [EC:4.2.1.11]
SFxv_1912  pykF; Pyruvate kinase I [KO:K00873] [EC:2.7.1.40]
SFxv_2088  pykA; Pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
SFxv_1712  pps; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
SFxv_0117  aceE; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
SFxv_0118  aceF; Pyruvate dehydrogenase dihydrolipoyltransacetylase component [KO:K00627] [EC:2.3.1.12]
SFxv_0119  lpd; putative pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component,-like enzyme [KO:K00382] [EC:1.8.1.4]
SFxv_2038  ydbK; putative oxidoreductase, Fe-S subunit [KO:K03737] [EC:1.2.7.1 1.2.7.-]
SFxv_1413  adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
SFxv_1955  adhP; putative Zn-dependent alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
SFxv_3953  yiaY; putative oxidoreductase [KO:K13954] [EC:1.1.1.1]
SFxv_4607  putative Zn-dependent alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
SFxv_3952  aldB; Aldehyde dehydrogenase B [KO:K00138] [EC:1.2.1.-]
SFxv_4305  yihR; putative aldose-1-epimerase [KO:K01785] [EC:5.1.3.3]
SFxv_0604  galM; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
SFxv_2847  hypothetical protein [KO:K01785] [EC:5.1.3.3]
SFxv_1091  agp; Periplasmic glucose-1-phosphatase [KO:K01085] [EC:3.1.3.10]
SFxv_4311  yihX; Phosphatase yihX [KO:K20866] [EC:3.1.3.10]
SFxv_0667  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
SFxv_1629  yeaD; Aldose 1-epimerase family protein [KO:K01792] [EC:5.1.3.15]
SFxv_3735  pck; Phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
SFxv_3166  bglA; 6-phospho-beta-glucosidase A [KO:K01223] [EC:3.2.1.86]
SFxv_4069  bglB; Phospho-beta-glucosidase B cryptic [KO:K01223] [EC:3.2.1.86]
SFxv_2721  crr; Glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
SFxv_1257  ptsG; Glucose-specific IIBC component [KO:K02779] [EC:2.7.1.199]
SFxv_1847  malX; PTS system, maltose and glucose-specific IIABC component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sfe00020  Citrate cycle (TCA cycle)
sfe00030  Pentose phosphate pathway
sfe00500  Starch and sucrose metabolism
sfe00620  Pyruvate metabolism
sfe00640  Propanoate metabolism
sfe00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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