KEGG   PATHWAY: sfs00010
Entry
sfs00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Shigella flexneri Shi06HN006 (serotype Yv)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sfs00010  Glycolysis / Gluconeogenesis
sfs00010

Module
sfs_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sfs00010]
sfs_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sfs00010]
sfs_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sfs00010]
sfs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sfs00010]
Other DBs
GO: 0006096 0006094
Organism
Shigella flexneri Shi06HN006 (serotype Yv) [GN:sfs]
Gene
SFyv_3558  Glucokinase [KO:K00845] [EC:2.7.1.2]
SFyv_6070  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SFyv_5774  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
SFyv_2212  6-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
SFyv_6185  fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
SFyv_5787  Fructose-1,6-bisphosphatase class 2 [KO:K02446] [EC:3.1.3.11]
SFyv_4232  fructose-1,6-bisphosphatase II-like protein [KO:K02446] [EC:3.1.3.11]
SFyv_3121  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
SFyv_4218  FbaA [KO:K01624] [EC:4.1.2.13]
SFyv_5780  Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SFyv_2628  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
SFyv_2119  Glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
SFyv_4221  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SFyv_0766  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
SFyv_6427  putative phosphoglycerate mutase GpmB [KO:K15634] [EC:5.4.2.11]
SFyv_5280  GpmM [KO:K15633] [EC:5.4.2.12]
SFyv_4055  Enolase [KO:K01689] [EC:4.2.1.11]
SFyv_2500  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SFyv_2732  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SFyv_2241  PPsA [KO:K01007] [EC:2.7.9.2]
SFyv_0143  AceE [KO:K00163] [EC:1.2.4.1]
SFyv_0145  dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
SFyv_0147  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SFyv_2668  YdbK [KO:K03737] [EC:1.2.7.1 1.2.7.-]
SFyv_1843  AdhE [KO:K04072] [EC:1.2.1.10 1.1.1.1]
SFyv_2557  AdhP [KO:K13953] [EC:1.1.1.1]
SFyv_5246  YiaY [KO:K13954] [EC:1.1.1.1]
SFyv_6135  oxidoreductase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
SFyv_5245  aldehyde dehydrogenase B [KO:K00138] [EC:1.2.1.-]
SFyv_5999  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
SFyv_0765  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
SFyv_5709  aldose-1-epimerase [KO:K01785] [EC:5.1.3.3]
SFyv_3755  hypothetical protein [KO:K01785] [EC:5.1.3.3]
SFyv_1421  glucose-1-phosphatase/inositol phosphatase [KO:K01085] [EC:3.1.3.10]
SFyv_5715  HAD-superfamily hydrolase, subfamily IA, variant 3 [KO:K20866] [EC:3.1.3.10]
SFyv_0859  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
SFyv_2117  YeaD [KO:K01792] [EC:5.1.3.15]
SFyv_4939  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
SFyv_2195  CelF [KO:K01222] [EC:3.2.1.86]
SFyv_4189  BglA [KO:K01223] [EC:3.2.1.86]
SFyv_5401  phospho-beta-glucosidase B cryptic [KO:K01223] [EC:3.2.1.86]
SFyv_3587  Glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
SFyv_1644  PtsG [KO:K02779] [EC:2.7.1.199]
SFyv_2407  MalX [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sfs00020  Citrate cycle (TCA cycle)
sfs00030  Pentose phosphate pathway
sfs00500  Starch and sucrose metabolism
sfs00620  Pyruvate metabolism
sfs00640  Propanoate metabolism
sfs00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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