KEGG   PATHWAY: smm04137
Entry
smm04137                    Pathway                                
Name
Mitophagy - animal - Schistosoma mansoni
Description
Mitochondria act as the energy powerhouse of the cell, and are essential for eukaryotic cells to grow and function normally. However, deleterious byproducts of oxidative phosphorylation process called reactive oxidative species (ROS) lead to mitochondrial dysfunction. If the damage is too excessive to be repaired, such mitochondria are selectively recognized and targeted for degradation by a specific mode of autophagy, termed mitophagy. The loss of the mitochondrial membrane potential can induce mitophagy, involving the kinase PINK1 and the E3 ligase Parkin. PINK1 serves as the sensor for the mitochondrial depolarization and recruits Parkin, followed by ubiquitin-dependent recruitment of mitophagy receptors. There are also several PINK1/Parkin-independent mitophagy pathways, in which a group of LIR-containing receptors are required in response to different stimuli. Mitophagy contributes to the maintenance of a healthy mitochondrial network and the prevention of programmed cell death.
Class
Cellular Processes; Transport and catabolism
Pathway map
smm04137  Mitophagy - animal
smm04137

Other DBs
GO: 0000422
Organism
Schistosoma mansoni [GN:smm]
Gene
Smp_156350  hypothetical protein [KO:K17985]
Smp_056390  protein kinase [KO:K05688] [EC:2.7.11.1]
Smp_042560  putative mitochondrial import receptor subunit tom40 [KO:K11518]
Smp_010930  putative heat shock protein 70 (hsp70)-interacting protein [KO:K17768]
Smp_010110.1  hypothetical protein [KO:K10660] [EC:2.3.2.27]
Smp_150210.1  putative autocrine motility factor receptor,amfr [KO:K10636] [EC:2.3.2.36]
Smp_047420  putative autocrine motility factor receptor, amfr [KO:K10636] [EC:2.3.2.36]
Smp_000650  ubiquitin ligase sina (ec 6.3.2.-) (seven in absentia homolog)(smsina) [KO:K04506] [EC:2.3.2.27]
Smp_130600  putative ariadne-1 protein homolog (ari-1) (ubiquitin-conjugating enzyme E2-binding protein 1) [KO:K11968] [EC:2.3.2.31]
Smp_132620.1  transmembrane gtpase mfn (mitofusin 1) (fzo homolog), putative [KO:K06030] [EC:3.6.5.-]
Smp_149440  putative rac-GTP binding protein [KO:K07870] [EC:3.6.5.-]
Smp_089430  ubiquitin (ribosomal protein L40), putative [KO:K02927]
Smp_017280  putative ubiquitin [KO:K02977]
Smp_087940.1  putative gaba(A) receptor-associated protein [KO:K08341]
Smp_073790  putative gaba(A) receptor-associated protein [KO:K08341]
Smp_048990  putative beclin [KO:K08334]
Smp_122960.1  ubiquitin-specific peptidase 30 (C19 family) [KO:K11851] [EC:3.4.19.12]
Smp_059910.1  hypothetical protein [KO:K15637] [EC:3.1.3.16]
Smp_099030  protein kinase [KO:K03097] [EC:2.7.11.1]
Smp_025010  putative casein kinase II beta subunit [KO:K03115]
Smp_006920  tyrosine kinase [KO:K05704] [EC:2.7.10.2]
Smp_070330  putative fun14 domain containing [KO:K17986]
Smp_040500  putative fk506 binding protein [KO:K09574] [EC:5.2.1.8]
Smp_166680  putative sorting and assembly machinery (sam50) protein [KO:K07277]
Smp_075210.1  putative prohibitin [KO:K17081]
Smp_176760  metaxin, putative [KO:K17776]
Smp_093750.1  putative eukaryotic translation initiation factor 2 alpha subunit [KO:K03237]
Smp_172240  serine/threonine kinase [KO:K04440] [EC:2.7.11.24]
Smp_179910  Ras-like protein [KO:K07827]
Smp_084940.1  putative gtp-binding protein rit [KO:K07831]
Smp_012010  hypothetical protein [KO:K09408]
Smp_160710  putative upstream stimulatory factor [KO:K09455]
Smp_145180  putative rab GDP/GTP exchange factor [KO:K20131]
Smp_040570.1  putative rab5 [KO:K07889]
Smp_140440  hypothetical protein [KO:K20195]
Smp_158030.1  unnamed protein product [KO:K27045]
Smp_067140  putative rab9 and [KO:K07897]
Smp_130480  TBC1 domain family member 15, putative [KO:K20168]
Smp_032230  hypothetical protein [KO:K17969]
Smp_149960  hypothetical protein [KO:K17907]
Smp_028120  optic atrophy 1-like protein, opa1 [KO:K17079] [EC:3.6.5.5]
Smp_018240.1  cell division control protein 48 aaa family protein (transitional endoplasmic reticulum atpase),putative [KO:K13525]
Compound
C00035  GDP
C00044  GTP
Reference
  Authors
Pickrell AM, Youle RJ
  Title
The roles of PINK1, parkin, and mitochondrial fidelity in Parkinson's disease.
  Journal
Neuron 85:257-73 (2015)
DOI:10.1016/j.neuron.2014.12.007
Reference
  Authors
Durcan TM, Fon EA
  Title
The three 'P's of mitophagy: PARKIN, PINK1, and post-translational modifications.
  Journal
Genes Dev 29:989-99 (2015)
DOI:10.1101/gad.262758.115
Reference
  Authors
Shirihai OS, Song M, Dorn GW 2nd
  Title
How mitochondrial dynamism orchestrates mitophagy.
  Journal
Circ Res 116:1835-49 (2015)
DOI:10.1161/CIRCRESAHA.116.306374
Reference
  Authors
Hamacher-Brady A, Brady NR
  Title
Mitophagy programs: mechanisms and physiological implications of mitochondrial targeting by autophagy.
  Journal
Cell Mol Life Sci 73:775-95 (2016)
DOI:10.1007/s00018-015-2087-8
Reference
  Authors
Yamano K, Matsuda N, Tanaka K
  Title
The ubiquitin signal and autophagy: an orchestrated dance leading to mitochondrial degradation.
  Journal
EMBO Rep 17:300-16 (2016)
DOI:10.15252/embr.201541486
Reference
  Authors
Yamaguchi O, Murakawa T, Nishida K, Otsu K
  Title
Receptor-mediated mitophagy.
  Journal
J Mol Cell Cardiol 95:50-6 (2016)
DOI:10.1016/j.yjmcc.2016.03.010
Reference
  Authors
Roberts RF, Tang MY, Fon EA, Durcan TM
  Title
Defending the mitochondria: The pathways of mitophagy and mitochondrial-derived vesicles.
  Journal
Int J Biochem Cell Biol 79:427-436 (2016)
DOI:10.1016/j.biocel.2016.07.020
Reference
  Authors
Arena G, Valente EM
  Title
PINK1 in the limelight: multiple functions of an eclectic protein in human health and disease.
  Journal
J Pathol 241:251-263 (2017)
DOI:10.1002/path.4815
Related
pathway
smm04140  Autophagy - animal
KO pathway
ko04137   
LinkDB

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