KEGG   PATHWAY: sod00010
Entry
sod00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Sodalis praecaptivus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sod00010  Glycolysis / Gluconeogenesis
sod00010

Module
sod_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sod00010]
sod_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sod00010]
sod_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sod00010]
sod_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sod00010]
Other DBs
GO: 0006096 0006094
Organism
Sodalis praecaptivus [GN:sod]
Gene
Sant_1270  Glucokinase [KO:K00845] [EC:2.7.1.2]
Sant_3883  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Sant_3982  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Sant_P0162  Putative 6-phosphofructokinase isozyme II [KO:K00850] [EC:2.7.1.11]
Sant_3479  fbp; Fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Sant_3976  glpX; Fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
Sant_0681  Deoxyribose-phosphate aldolase\phospho-2-dehydro-3-deoxyheptonate aldolase [KO:K11645] [EC:4.1.2.13]
Sant_0053  Fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Sant_2354  Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Sant_0319  Tagatose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Sant_0320  Ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Sant_0765  fbaA; Fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
Sant_3980  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Sant_1815  gapA; Glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
Sant_0764  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Sant_2749  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
Sant_2712  Phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
Sant_3415  gpmB; Phosphoglycerate mutase [KO:K15634] [EC:5.4.2.11]
Sant_3261  eno; Phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
Sant_P0239  Enolase [KO:K01689] [EC:4.2.1.11]
Sant_1696  pykA; Pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
Sant_1956  Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Sant_2049  pykF; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Sant_2063  ppsA; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
Sant_3328  aceE; Pyruvate dehydrogenase subunit E1 [KO:K00163] [EC:1.2.4.1]
Sant_3327  aceF; Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
Sant_3326  lpdA; Dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Sant_1910  Pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
Sant_1494  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
Sant_1424  Alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Sant_1834  adhE; Bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Sant_3765  Alcohol dehydrogenase GroES domain protein [KO:K13953] [EC:1.1.1.1]
Sant_0545  Alcohol dehydrogenase, GroES domain protein [KO:K13979] [EC:1.1.1.2]
Sant_0684  Aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Sant_P0356  Aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
Sant_0106  Aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
Sant_3845  acs; Acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
Sant_2748  galM; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Sant_0533  Glucose-1-phosphatase [KO:K01085] [EC:3.1.3.10]
Sant_4071  yihX; Phosphatase [KO:K20866] [EC:3.1.3.10]
Sant_2782  pgm; Phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Sant_1814  yeaD; Aldose 1-epimerase [KO:K01792] [EC:5.1.3.15]
Sant_0372  pckA; Phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Sant_P0177  Phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Sant_P0088  Glycoside hydrolase, family 1 [KO:K01223] [EC:3.2.1.86]
Sant_1240  crr; Glucose-specific PTS system component [KO:K02777] [EC:2.7.1.-]
Sant_2470  ptsG; PTS system glucose-specific transporter subunit IIBC [KO:K02779] [EC:2.7.1.199]
Sant_0932  PTS family glucose porter, IICBA component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Sant_1882  malX; PTS system, maltose and glucose-specific IIbc component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Sant_P0089  ascF; Cellobiose/arbutin/salicin-specific transporter [KO:K02753] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sod00020  Citrate cycle (TCA cycle)
sod00030  Pentose phosphate pathway
sod00500  Starch and sucrose metabolism
sod00620  Pyruvate metabolism
sod00640  Propanoate metabolism
sod00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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