KEGG   PATHWAY: soe00240
Entry
soe00240                    Pathway                                
Name
Pyrimidine metabolism - Spinacia oleracea (spinach)
Class
Metabolism; Nucleotide metabolism
Pathway map
soe00240  Pyrimidine metabolism
soe00240

Module
soe_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:soe00240]
soe_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:soe00240]
soe_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:soe00240]
soe_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:soe00240]
Other DBs
GO: 0006220 0006213
Organism
Spinacia oleracea (spinach) [GN:soe]
Gene
110776358  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
110775830  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
110788719  aspartate carbamoyltransferase 1, chloroplastic [KO:K00609] [EC:2.1.3.2]
110776733  dihydroorotase, mitochondrial-like [KO:K01465] [EC:3.5.2.3]
110779913  dihydroorotase, mitochondrial-like [KO:K01465] [EC:3.5.2.3]
110799885  dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1 [KO:K00254] [EC:1.3.5.2]
110793754  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
110800090  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
110795033  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
110790450  UMP-CMP kinase 3-like isoform X3 [KO:K13800] [EC:2.7.4.14]
110782381  probable UMP-CMP kinase 2 isoform X1 [KO:K13800] [EC:2.7.4.14]
110774883  UMP-CMP kinase 3 [KO:K13800] [EC:2.7.4.14]
110803330  uridylate kinase PUMPKIN, chloroplastic [KO:K09903] [EC:2.7.4.22]
110774835  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
110803934  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
110798615  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
110782987  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
110783954  apyrase 2-like [KO:K14641] [EC:3.6.1.5]
110793855  uncharacterized protein LOC110793855 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
110782921  uncharacterized protein LOC110782921 [KO:K01937] [EC:6.3.4.2]
110777314  uncharacterized protein LOC110777314 isoform X1 [KO:K01937] [EC:6.3.4.2]
110801970  uridine/cytidine kinase UKL1, chloroplastic [KO:K00876] [EC:2.7.1.48]
110782087  uridine kinase-like protein 3 isoform X1 [KO:K00876] [EC:2.7.1.48]
110795847  inorganic pyrophosphatase TTM1 [KO:K00876] [EC:2.7.1.48]
110795296  inorganic pyrophosphatase TTM2 [KO:K00876] [EC:2.7.1.48]
110797735  uncharacterized protein LOC110797735 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
110801045  uncharacterized protein LOC110801045 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
110796923  uncharacterized protein LOC110796923 isoform X1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
110785951  uridine nucleosidase 1 isoform X1 [KO:K01240] [EC:3.2.2.3]
110777882  probable uridine nucleosidase 2 isoform X1 [KO:K01240] [EC:3.2.2.3]
110795776  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
110783298  pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
110784536  uncharacterized protein LOC110784536 [KO:K24242] [EC:3.1.3.91]
110793860  cytidine deaminase 1 [KO:K01489] [EC:3.5.4.5]
110792679  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
110794252  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
110783576  ribonucleoside-diphosphate reductase small chain C [KO:K10808] [EC:1.17.4.1]
110784989  ribonucleoside-diphosphate reductase small chain C-like [KO:K10808] [EC:1.17.4.1]
130469574  LOW QUALITY PROTEIN: ribonucleoside-diphosphate reductase small chain A-like [KO:K10808] [EC:1.17.4.1]
110787342  uncharacterized protein LOC110787342 [KO:K16904] [EC:3.6.1.12]
110775089  uncharacterized protein LOC110775089 [KO:K16904] [EC:3.6.1.12]
110799116  uncharacterized protein LOC110799116 [KO:K16904] [EC:3.6.1.12]
110786333  uncharacterized protein LOC110786333 [KO:K07023] [EC:3.1.3.89]
110776417  uncharacterized protein LOC110776417 [KO:K07023] [EC:3.1.3.89]
110787266  uncharacterized protein LOC110787266 isoform X1 [KO:K01493] [EC:3.5.4.12]
110794806  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
110802944  thymidylate kinase [KO:K00943] [EC:2.7.4.9]
110801338  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
110803839  thymidine kinase a [KO:K00857] [EC:2.7.1.21]
110803064  putative bifunctional dihydrofolate reductase-thymidylate synthase [KO:K13998] [EC:1.5.1.3 2.1.1.45]
110779297  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic [KO:K00207] [EC:1.3.1.2]
110783328  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
110801430  beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
soe00030  Pentose phosphate pathway
soe00220  Arginine biosynthesis
soe00250  Alanine, aspartate and glutamate metabolism
soe00280  Valine, leucine and isoleucine degradation
soe00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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