KEGG   PATHWAY: staa00630
Entry
staa00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Streptomyces tanashiensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
staa00630  Glyoxylate and dicarboxylate metabolism
staa00630

Module
staa_M00621  Glycine cleavage system [PATH:staa00630]
staa_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:staa00630]
Other DBs
GO: 0046487 0043648
Organism
Streptomyces tanashiensis [GN:staa]
Gene
LDH80_21845  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LDH80_09055  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
LDH80_09240  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
LDH80_08920  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
LDH80_16085  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
LDH80_17580  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
LDH80_25640  citrate synthase [KO:K01647] [EC:2.3.3.1]
LDH80_10200  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
LDH80_27505  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
LDH80_24125  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LDH80_05345  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
LDH80_07910  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LDH80_13270  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LDH80_36310  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LDH80_13275  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
LDH80_08495  protein meaA [KO:K14447] [EC:5.4.99.63]
LDH80_15610  biotin/lipoyl-binding protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
LDH80_15580  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
LDH80_15585  acyl-CoA carboxylase subunit epsilon [KO:K27095]
LDH80_06845  methylmalonyl-CoA mutase subunit beta [KO:K01847] [EC:5.4.99.2]
LDH80_06850  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
LDH80_15845  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
LDH80_04285  methylaspartate mutase [KO:K19268] [EC:5.4.99.1]
LDH80_04290  cobalamin-dependent protein [KO:K01846] [EC:5.4.99.1]
LDH80_09250  cobalamin-dependent protein [KO:K01846] [EC:5.4.99.1]
LDH80_24925  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
LDH80_14175  catalase [KO:K03781] [EC:1.11.1.6]
LDH80_01275  catalase [KO:K03781] [EC:1.11.1.6]
LDH80_09005  catalase [KO:K03781] [EC:1.11.1.6]
LDH80_17870  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
LDH80_28195  glutamine synthetase beta-grasp domain-containing protein [KO:K01915] [EC:6.3.1.2]
LDH80_28025  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LDH80_28235  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
LDH80_31475  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LDH80_16025  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LDH80_12930  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LDH80_13440  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LDH80_32750  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
LDH80_12920  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
LDH80_19970  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LDH80_28330  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LDH80_12925  gcvH; glycine cleavage system protein GcvH [KO:K02437]
LDH80_09025  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
LDH80_08995  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
LDH80_09000  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
LDH80_08570  glycerate kinase [KO:K00865] [EC:2.7.1.165]
LDH80_27775  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LDH80_13735  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
LDH80_17475  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
staa00010  Glycolysis / Gluconeogenesis
staa00020  Citrate cycle (TCA cycle)
staa00030  Pentose phosphate pathway
staa00053  Ascorbate and aldarate metabolism
staa00071  Fatty acid degradation
staa00230  Purine metabolism
staa00250  Alanine, aspartate and glutamate metabolism
staa00260  Glycine, serine and threonine metabolism
staa00620  Pyruvate metabolism
staa00710  Carbon fixation by Calvin cycle
staa00750  Vitamin B6 metabolism
staa00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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