KEGG   PATHWAY: tru03250
Entry
tru03250                    Pathway                                
Name
Viral life cycle - HIV-1 - Takifugu rubripes (torafugu)
Class
Genetic Information Processing; Information processing in viruses
Pathway map
tru03250  Viral life cycle - HIV-1
tru03250

Organism
Takifugu rubripes (torafugu) [GN:tru]
Gene
101070891  C-C chemokine receptor type 2-like [KO:K04180]
101066475  cxcr4; C-X-C chemokine receptor type 4 [KO:K04189]
778001  cd4; T-cell surface glycoprotein CD4 [KO:K06454]
101076115  map1b; microtubule-associated protein 1B [KO:K10429]
101066557  microtubule-associated protein 1S-like [KO:K10429]
101069605  microtubule-associated protein 1B-like isoform X1 [KO:K10429]
101079152  map1a; microtubule-associated protein 1A isoform X1 [KO:K10429]
101064285  map1s; microtubule-associated protein 1S [KO:K10429]
101066663  fez1; fasciculation and elongation protein zeta-1 [KO:K25663]
101063122  protein bicaudal D homolog 2 isoform X2 [KO:K18739]
101065151  protein bicaudal D homolog 1-like isoform X1 [KO:K18739]
101071422  protein bicaudal D homolog 2-like isoform X1 [KO:K18739]
101072004  protein bicaudal D homolog 2-like [KO:K18739]
101076731  bicd1; protein bicaudal D homolog 1 isoform X1 [KO:K18739]
115247001  protein bicaudal D homolog 2-like [KO:K18739]
105419139  protein bicaudal D homolog 2-like [KO:K18739]
115247003  protein bicaudal D homolog 2-like [KO:K18739]
101063041  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
101070722  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
105416260  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
101076295  psip1; PC4 and SFRS1-interacting protein isoform X1 [KO:K25057]
101079535  pin1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
101070741  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like [KO:K11648]
101067729  smarcb1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 [KO:K11648]
101071268  peptidyl-prolyl cis-trans isomerase-like isoform X1 [KO:K03767] [EC:5.2.1.8]
101069204  peptidyl-prolyl cis-trans isomerase-like [KO:K03767] [EC:5.2.1.8]
101071036  peptidyl-prolyl cis-trans isomerase-like [KO:K03767] [EC:5.2.1.8]
101066520  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
101070366  cpsf7; cleavage and polyadenylation specificity factor subunit 7 isoform X1 [KO:K14398]
101066960  cpsf6; cleavage and polyadenylation specificity factor subunit 6 isoform X3 [KO:K14398]
101080098  tnpo3; transportin-3 [KO:K15436]
101075037  interferon-induced GTP-binding protein Mx [KO:K14754]
115246786  interferon-induced GTP-binding protein Mx-like [KO:K14754]
115246787  interferon-induced GTP-binding protein Mx-like [KO:K14754]
101077614  E3 SUMO-protein ligase RanBP2 isoform X1 [KO:K12172] [EC:2.3.2.-]
101078617  nup153; nuclear pore complex protein Nup153 isoform X1 [KO:K14296]
101078373  crebbp; CREB-binding protein [KO:K04498] [EC:2.3.1.48]
101070643  ep300; histone acetyltransferase p300 isoform X1 [KO:K04498] [EC:2.3.1.48]
446056  histone acetyltransferase p300 isoform X1 [KO:K04498] [EC:2.3.1.48]
101073984  CREB-binding protein-like isoform X1 [KO:K04498] [EC:2.3.1.48]
115248448  histone acetyltransferase p300-like isoform X1 [KO:K04498] [EC:2.3.1.48]
101072241  kat2a; histone acetyltransferase KAT2A [KO:K06062] [EC:2.3.1.48]
101070909  histone acetyltransferase KAT2B isoform X2 [KO:K06062] [EC:2.3.1.48]
101075585  cdk9; cyclin-dependent kinase 9 [KO:K02211] [EC:2.7.11.22 2.7.11.23]
101074552  ccnt2; cyclin-T2 [KO:K15188]
101079666  cyclin-T2-like [KO:K15188]
101080167  ccnt1; cyclin-T1 isoform X2 [KO:K15188]
101062415  aff4; AF4/FMR2 family member 4 isoform X1 [KO:K15185]
101080126  RNA polymerase II elongation factor ELL-like [KO:K15183]
101062747  RNA polymerase II elongation factor ELL-like [KO:K15183]
101079393  ell2; RNA polymerase II elongation factor ELL2 [KO:K15183]
101062125  ell; RNA polymerase II elongation factor ELL [KO:K15183]
101072365  RNA polymerase II elongation factor ELL2-like isoform X1 [KO:K15183]
101068150  mllt3; protein AF-9 isoform X1 [KO:K15187]
101069798  mllt1; protein ENL isoform X1 [KO:K15187]
101076463  nelfa; negative elongation factor A [KO:K15179]
101079096  nelfb; negative elongation factor B [KO:K15180]
101069630  nelfcd; negative elongation factor C/D [KO:K15181]
101075996  nelfe; LOW QUALITY PROTEIN: negative elongation factor E [KO:K15182]
101076917  supt4h1; transcription elongation factor SPT4 [KO:K15171]
101064061  supt5h; transcription elongation factor SPT5 isoform X6 [KO:K15172]
101079764  xpo1; exportin-1 [KO:K14290]
101073809  exportin-1 [KO:K14290]
115249566  exportin-1 [KO:K14290]
101070070  ran; GTP-binding nuclear protein Ran [KO:K07936]
101061571  furin [KO:K01349] [EC:3.4.21.75]
101078322  furin-1-like [KO:K01349] [EC:3.4.21.75]
101077984  serine incorporator 1 [KO:K25661]
101073033  serinc5; serine incorporator 5 [KO:K25655]
101075142  hgs; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X4 [KO:K12182]
101079670  tumor susceptibility gene 101 protein-like isoform X2 [KO:K12183]
101074991  chmp6; charged multivesicular body protein 6 [KO:K12195]
101067383  charged multivesicular body protein 6-like [KO:K12195]
101072878  charged multivesicular body protein 4b [KO:K12194]
101063168  chmp4b; charged multivesicular body protein 4b [KO:K12194]
101071813  pdcd6ip; programmed cell death 6-interacting protein isoform X2 [KO:K12200]
101066795  vps4a; vacuolar protein sorting-associated protein 4A [KO:K12196]
101077130  vacuolar protein sorting-associated protein 4B-like isoform X1 [KO:K12196]
101069250  vps4b; vacuolar protein sorting-associated protein 4B isoform X1 [KO:K12196]
Reference
PMID:27357278
  Authors
Li G, De Clercq E
  Title
HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  Journal
Microbiol Mol Biol Rev 80:679-731 (2016)
DOI:10.1128/MMBR.00065-15
Reference
PMID:21284899
  Authors
Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  Title
Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  Journal
J Transl Med 9 Suppl 1:S1 (2011)
DOI:10.1186/1479-5876-9-S1-S1
Reference
PMID:31028522
  Authors
Novikova M, Zhang Y, Freed EO, Peng K
  Title
Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  Journal
Virol Sin 34:119-134 (2019)
DOI:10.1007/s12250-019-00095-3
Reference
PMID:30286189
  Authors
Rawle DJ, Harrich D
  Title
Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  Journal
PLoS Pathog 14:e1007270 (2018)
DOI:10.1371/journal.ppat.1007270
Reference
PMID:25036886
  Authors
Le Sage V, Mouland AJ, Valiente-Echeverria F
  Title
Roles of HIV-1 capsid in viral replication and immune evasion.
  Journal
Virus Res 193:116-29 (2014)
DOI:10.1016/j.virusres.2014.07.010
Reference
PMID:32429351
  Authors
Murphy RE, Saad JS
  Title
The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  Journal
Viruses 12:E548 (2020)
DOI:10.3390/v12050548
Reference
PMID:21360054
  Authors
He N, Zhou Q
  Title
New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  Journal
J Neuroimmune Pharmacol 6:260-8 (2011)
DOI:10.1007/s11481-011-9267-6
Reference
PMID:19865606
  Authors
Pincetic A, Leis J
  Title
The Mechanism of Budding of Retroviruses From Cell Membranes.
  Journal
Adv Virol 2009:6239691-6239699 (2009)
DOI:10.1155/2009/623969
Reference
PMID:32858867
  Authors
Kleinpeter AB, Freed EO
  Title
HIV-1 Maturation: Lessons Learned from Inhibitors.
  Journal
Viruses 12:E940 (2020)
DOI:10.3390/v12090940
Related
pathway
tru03013  Nucleocytoplasmic transport
tru04144  Endocytosis
KO pathway
ko03250   
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