KEGG   PATHWAY: tvl00010
Entry
tvl00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Trinickia violacea
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
tvl00010  Glycolysis / Gluconeogenesis
tvl00010

Module
tvl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:tvl00010]
tvl_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:tvl00010]
tvl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tvl00010]
Other DBs
GO: 0006096 0006094
Organism
Trinickia violacea [GN:tvl]
Gene
FAZ95_16740  bifunctional transcriptional regulator/glucokinase [KO:K00845] [EC:2.7.1.2]
FAZ95_11285  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
FAZ95_16495  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
FAZ95_20500  fructose-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
FAZ95_03665  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
FAZ95_34895  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
FAZ95_05985  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
FAZ95_18910  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
FAZ95_03655  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
FAZ95_02155  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
FAZ95_18715  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
FAZ95_08655  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
FAZ95_03660  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FAZ95_22015  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FAZ95_09185  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
FAZ95_08505  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
FAZ95_11695  mdeB; alpha-ketoglutarate dehydrogenase [KO:K00163] [EC:1.2.4.1]
FAZ95_08510  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
FAZ95_17850  2-oxoglutarate dehydrogenase [KO:K00627] [EC:2.3.1.12]
FAZ95_08515  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FAZ95_10595  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FAZ95_12695  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FAZ95_03775  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
FAZ95_11985  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
FAZ95_12230  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
FAZ95_27640  zinc-dependent alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
FAZ95_27675  zinc-binding dehydrogenase [KO:K00001] [EC:1.1.1.1]
FAZ95_30485  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
FAZ95_12195  PQQ-dependent dehydrogenase, methanol/ethanol family [KO:K00114] [EC:1.1.2.8]
FAZ95_05080  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
FAZ95_20605  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
FAZ95_22735  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
FAZ95_25575  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
FAZ95_32860  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
FAZ95_00110  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
FAZ95_12200  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
FAZ95_00120  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
FAZ95_06345  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FAZ95_07930  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FAZ95_13625  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
FAZ95_32560  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
FAZ95_14595  CoA-binding protein [KO:K24012] [EC:6.2.1.13]
FAZ95_18310  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
FAZ95_18965  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
FAZ95_27425  HAD family phosphatase [KO:K20866] [EC:3.1.3.10]
FAZ95_17155  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
FAZ95_38440  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
FAZ95_34890  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
FAZ95_21365  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
tvl00020  Citrate cycle (TCA cycle)
tvl00030  Pentose phosphate pathway
tvl00500  Starch and sucrose metabolism
tvl00620  Pyruvate metabolism
tvl00640  Propanoate metabolism
tvl00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system