KEGG   PATHWAY: pfc00010
Entry
pfc00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas fluorescens A506
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pfc00010  Glycolysis / Gluconeogenesis
pfc00010

Module
pfc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pfc00010]
pfc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pfc00010]
pfc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfc00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas fluorescens A506 [GN:pfc]
Gene
PflA506_4272  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
PflA506_4536  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PflA506_0337  fbp; fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
PflA506_4997  fba; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
PflA506_4552  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
PflA506_4274  gap_1; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
PflA506_1580  gap_2; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
PflA506_5000  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PflA506_0322  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
PflA506_1253  eno; enolase [KO:K01689] [EC:4.2.1.11]
PflA506_4259  pyk_1; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PflA506_1820  pyk_2; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PflA506_3923  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
PflA506_0451  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
PflA506_0450  aceF; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form [KO:K00627] [EC:2.3.1.12]
PflA506_2317  acoC; acetoin dehydrogenase E2 component, dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
PflA506_3340  bkdC; 2-oxoisovalerate dehydrogenase E3 component, dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PflA506_1843  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PflA506_1257  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PflA506_1372  adhB; alcohol dehydrogenase II [KO:K13954] [EC:1.1.1.1]
PflA506_3985  oxidoreductase, zinc-binding dehydrogenase family [KO:K13979] [EC:1.1.1.2]
PflA506_0052  gluconate 2-dehydrogenase cytochrome c subunit [KO:K22474] [EC:1.1.5.5]
PflA506_2212  cytochrome c family protein [KO:K22474] [EC:1.1.5.5]
PflA506_4734  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
PflA506_2699  AMP-binding domain protein [KO:K01895] [EC:6.2.1.1]
PflA506_4079  acsA_1; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
PflA506_4537  acsA_2; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
PflA506_2253  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
PflA506_3330  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
PflA506_2605  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
PflA506_5268  algC; phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PflA506_5332  aldose 1-epimerase family protein [KO:K01792] [EC:5.1.3.15]
PflA506_3222  aldehyde dehydrogenase (NAD) family protein [KO:K00131] [EC:1.2.1.9]
PflA506_0267  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pfc00020  Citrate cycle (TCA cycle)
pfc00030  Pentose phosphate pathway
pfc00500  Starch and sucrose metabolism
pfc00620  Pyruvate metabolism
pfc00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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