KEGG   PATHWAY: pfl00010
Entry
pfl00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas protegens Pf-5
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pfl00010  Glycolysis / Gluconeogenesis
pfl00010

Module
pfl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pfl00010]
pfl_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pfl00010]
pfl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfl00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas protegens Pf-5 [GN:pfl]
Gene
PFL_0055  [KO:K22474] [EC:1.1.5.5]
PFL_0268  lpdA_2; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PFL_0284  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
PFL_0371  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
PFL_0393  fbp; fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
PFL_0508  aceF; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form [KO:K00627] [EC:2.3.1.12]
PFL_0509  aceE_2; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
PFL_0839  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
PFL_1196  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
PFL_1200  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PFL_1399  adhB; alcohol dehydrogenase II [KO:K13954] [EC:1.1.1.1]
PFL_1697  pyk_1; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PFL_1720  lpdA_1; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PFL_1816  [KO:K13979] [EC:1.1.1.2]
PFL_1869  ppsA; pyruvate, water dikinase [KO:K01007] [EC:2.7.9.2]
PFL_1955  gap_1; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
PFL_2172  acoC; acetoin dehydrogenase E2 component, dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
PFL_2216  pedE; quinoprotein ethanol dehydrogenase PedE [KO:K00114] [EC:1.1.2.8]
PFL_2221  pedH; quinoprotein ethanol dehydrogenase PedH [KO:K00114] [EC:1.1.2.8]
PFL_2222  pedI; aldehyde dehydrogenase PedI [KO:K00138] [EC:1.2.1.-]
PFL_2420  [KO:K13979] [EC:1.1.1.2]
PFL_2531  bkdC; 2-oxoisovalerate dehydrogenase E3 component, dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PFL_3068  [KO:K01895] [EC:6.2.1.1]
PFL_3231  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
PFL_3475  xylC; benzaldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
PFL_3648  [KO:K00128] [EC:1.2.1.3]
PFL_3718  [KO:K00131] [EC:1.2.1.9]
PFL_3977  aceE_1; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
PFL_4068  adh; alcohol dehydrogenase, zinc-dependent [KO:K28615]
PFL_4522  acsA_1; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
PFL_4621  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
PFL_4623  gap_2; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
PFL_4797  pyk_2; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PFL_5280  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PFL_5281  acsA_2; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
PFL_5469  [KO:K00138] [EC:1.2.1.-]
PFL_5781  fba; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
PFL_5784  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PFL_6054  algC; phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PFL_6122  [KO:K01792] [EC:5.1.3.15]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pfl00020  Citrate cycle (TCA cycle)
pfl00030  Pentose phosphate pathway
pfl00500  Starch and sucrose metabolism
pfl00620  Pyruvate metabolism
pfl00640  Propanoate metabolism
pfl00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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