KEGG   PATHWAY: pfs00010
Entry
pfs00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas fluorescens SBW25
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pfs00010  Glycolysis / Gluconeogenesis
pfs00010

Module
pfs_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pfs00010]
pfs_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pfs00010]
pfs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfs00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas fluorescens SBW25 [GN:pfs]
Gene
PFLU_4963  Glucokinase (EC (Glucose kinase) [KO:K00845] [EC:2.7.1.2]
PFLU_5243  Glucose-6-phosphate isomerase (GPI) (EC (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) [KO:K01810] [EC:5.3.1.9]
PFLU_0355  fbp; Fructose-1,6-bisphosphatase class 1 (FBPase class 1) (EC (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1) [KO:K03841] [EC:3.1.3.11]
PFLU_5701  fbA; Fructose-1,6-bisphosphate aldolase (FBP aldolase) (EC [KO:K01624] [EC:4.1.2.13]
PFLU_5257  Triosephosphate isomerase (TIM) (TPI) (EC (Triose-phosphate isomerase) [KO:K01803] [EC:5.3.1.1]
PFLU_4965  Glyceraldehyde-3-phosphate dehydrogenase (EC [KO:K00134] [EC:1.2.1.12]
PFLU_1566  gap; Glyceraldehyde-3-phosphate dehydrogenase (EC [KO:K00134] [EC:1.2.1.12]
PFLU_5705  pgk; Phosphoglycerate kinase (EC [KO:K00927] [EC:2.7.2.3]
PFLU_0337  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
PFLU_1903  eno; Enolase (EC (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase) [KO:K01689] [EC:4.2.1.11]
PFLU_1291  eno1; Enolase (EC (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase) [KO:K01689] [EC:4.2.1.11]
PFLU_1799  pyk; Pyruvate kinase (EC [KO:K00873] [EC:2.7.1.40]
PFLU_4949  Pyruvate kinase (EC [KO:K00873] [EC:2.7.1.40]
PFLU_4620  Phosphoenolpyruvate synthase (PEP synthase) (EC (Pyruvate, water dikinase) [KO:K01007] [EC:2.7.9.2]
PFLU_3920  Pyruvate dehydrogenase E1 component (EC [KO:K00163] [EC:1.2.4.1]
PFLU_0460  aceE1; Pyruvate dehydrogenase E1 component (EC [KO:K00163] [EC:1.2.4.1]
PFLU_3193  Pyruvate dehydrogenase E1 component (EC [KO:K00163] [EC:1.2.4.1]
PFLU_0459  aceF; Acetyltransferase component of pyruvate dehydrogenase complex (EC [KO:K00627] [EC:2.3.1.12]
PFLU_1822  lpd; Dihydrolipoyl dehydrogenase (EC [KO:K00382] [EC:1.8.1.4]
PFLU_3967  Dihydrolipoyl dehydrogenase (EC [KO:K00382] [EC:1.8.1.4]
PFLU_1295  adhC; Alcohol dehydrogenase class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PFLU_1412  Probable alcohol dehydrogenase (EC [KO:K13954] [EC:1.1.1.1]
PFLU_4115  Putative alcohol dehydrogenase (EC [KO:K00001] [EC:1.1.1.1]
PFLU_2410  Putative dehydrogenase [KO:K13979] [EC:1.1.1.2]
PFLU_4680  Putative NADP-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
PFLU_0053  adhB; Alcohol dehydrogenase cytochrome C subunit [KO:K22474] [EC:1.1.5.5]
PFLU_2270  Putative cytochrome C family protein [KO:K22474] [EC:1.1.5.5]
PFLU_4112  Putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
PFLU_4056  Putative betaine aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
PFLU_5441  Putative aldehyde dehydrigenase [KO:K00138] [EC:1.2.1.-]
PFLU_2290  Putative acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PFLU_3213  Acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PFLU_5244  Acetyl-coenzyme A synthetase (AcCoA synthetase) (Acs) (EC (Acetate--CoA ligase) (Acyl-activating enzyme) [KO:K01895] [EC:6.2.1.1]
PFLU_4766  Acetyl-coenzyme A synthetase (AcCoA synthetase) (Acs) (EC (Acetate--CoA ligase) (Acyl-activating enzyme) [KO:K01895] [EC:6.2.1.1]
PFLU_2375  Aldose 1-epimerase (EC [KO:K01785] [EC:5.1.3.3]
PFLU_3954  Putative epimerase [KO:K01785] [EC:5.1.3.3]
PFLU_3157  Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
PFLU_5986  Putative phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PFLU_6051  Putative glucose-6-phosphate 1-epimerase (EC [KO:K01792] [EC:5.1.3.15]
PFLU_3844  Putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
PFLU_0267  pckA; Phosphoenolpyruvate carboxykinase (ATP) (PCK) (PEP carboxykinase) (PEPCK) (EC [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pfs00020  Citrate cycle (TCA cycle)
pfs00030  Pentose phosphate pathway
pfs00500  Starch and sucrose metabolism
pfs00620  Pyruvate metabolism
pfs00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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