KEGG   PATHWAY: plum00010
Entry
plum00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Photorhabdus laumondii subsp. laumondii DSPV002N
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
plum00010  Glycolysis / Gluconeogenesis
plum00010

Module
plum_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:plum00010]
plum_M00002  Glycolysis, core module involving three-carbon compounds [PATH:plum00010]
plum_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:plum00010]
plum_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:plum00010]
Other DBs
GO: 0006096 0006094
Organism
Photorhabdus laumondii subsp. laumondii DSPV002N [GN:plum]
Gene
A4R40_07060  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
A4R40_21695  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
A4R40_23760  ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
A4R40_22535  fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
A4R40_13865  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
A4R40_04780  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A4R40_23750  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
A4R40_12715  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
A4R40_04775  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
A4R40_07480  gpmA; phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
A4R40_02770  phosphoglycerate mutase [KO:K15634] [EC:5.4.2.11]
A4R40_04560  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
A4R40_10620  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
A4R40_12995  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
A4R40_13085  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
A4R40_18000  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
A4R40_17995  aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
A4R40_17990  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A4R40_21470  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
A4R40_12425  bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
A4R40_07915  L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
A4R40_00705  betaine-aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
A4R40_18610  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
A4R40_00365  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
A4R40_02860  galM; galactose-1-epimerase [KO:K01785] [EC:5.1.3.3]
A4R40_01180  glucose-1-phosphatase [KO:K20866] [EC:3.1.3.10]
A4R40_07070  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
A4R40_00495  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
A4R40_13735  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
A4R40_11385  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
A4R40_02890  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
A4R40_06955  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
A4R40_01565  hypothetical protein [KO:K02791] [EC:2.7.1.199 2.7.1.208]
A4R40_09950  PTS glucose transporter subunit IIBC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
plum00020  Citrate cycle (TCA cycle)
plum00030  Pentose phosphate pathway
plum00500  Starch and sucrose metabolism
plum00620  Pyruvate metabolism
plum00640  Propanoate metabolism
plum00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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